Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737515.2_202016-10- 25] 302 sequences; 12,156,482 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12 275 1e-71 seq298 158 2e-36 >seq12 Length=1053330 Score = 275 bits (304), Expect = 1e-71 Identities = 229/295 (78%), Gaps = 54/295 (18%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 441391 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 441450 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441451 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 441510 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||| |||| Sbjct 441511 ATTC---------ATGA------------------------------------------- 441518 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441519 --ACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 441576 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441577 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 441631 Score = 203 bits (224), Expect = 6e-50 Identities = 115/117 (98%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479498 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 479557 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479558 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 479614 Score = 158 bits (174), Expect = 2e-36 Identities = 89/90 (99%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 479774 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 479833 Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||| Sbjct 479834 ATAGGCCACACTTTCATGGTTTGTATTCAC 479863 >seq298 Length=907 Score = 158 bits (174), Expect = 2e-36 Identities = 89/90 (99%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 60 Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||| Sbjct 61 ATAGGCCACACTTTCATGGTTTGTATTCAC 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397419712