Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737515.2_202016-10-
25] 302 sequences; 12,156,482 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq12 275 1e-71
seq298 158 2e-36
>seq12
Length=1053330
Score = 275 bits (304), Expect = 1e-71
Identities = 229/295 (78%), Gaps = 54/295 (18%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||
Sbjct 441391 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 441450
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441451 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 441510
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||| ||||
Sbjct 441511 ATTC---------ATGA------------------------------------------- 441518
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441519 --ACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 441576
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441577 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 441631
Score = 203 bits (224), Expect = 6e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479498 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 479557
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479558 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 479614
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 479774 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 479833
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 479834 ATAGGCCACACTTTCATGGTTTGTATTCAC 479863
>seq298
Length=907
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 60
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 61 ATAGGCCACACTTTCATGGTTTGTATTCAC 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854397419712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |