Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001737985.1_202016-09- 21] 587 sequences; 12,409,833 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12 515 1e-143 seq68 120 1e-24 >seq12 Length=1053926 Score = 515 bits (570), Expect = 1e-143 Identities = 308/320 (96%), Gaps = 5/320 (2%) Strand=Plus/Plus Query 225 GCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTA 283 |||||||| |||||||||||||||||| ||||| | ||| ||||||| ||| |||| Sbjct 447301 GCGCCGAA---GCTCCCACTTATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTA 447356 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 447357 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCT 447416 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447417 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 447476 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447477 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 447536 Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 447537 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 447596 Query 524 TGCGTCAACATCACTTTCTG 543 |||||||||||||||||||| Sbjct 447597 TGCGTCAACATCACTTTCTG 447616 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 488355 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 488414 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||| || Sbjct 488415 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 488448 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 447209 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 447268 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 447269 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 447299 >seq68 Length=860 Score = 120 bits (132), Expect = 1e-24 Identities = 72/76 (95%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 25 TTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGC 84 ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct 860 TTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGC 801 Query 85 CCCAGCCAAACTCCCC 100 ||||||||||||| || Sbjct 800 CCCAGCCAAACTCTCC 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635190401376