Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738395.1_202016-09-
21] 76 sequences; 12,238,557 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq12 219 7e-55
seq36 172 9e-41
>seq12
Length=1086630
Score = 219 bits (242), Expect = 7e-55
Identities = 229/292 (78%), Gaps = 18/292 (6%)
Strand=Plus/Minus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
|||||||||||| | | ||| || |||||||||||||||||||||||| |||||| ||
Sbjct 464249 TACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATTG 464192
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 464191 CCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAG 464132
Query 122 AACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT-------- 169
|||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 464131 AACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTGG 464072
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCA 226
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 464071 CGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-T 464013
Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||||| ||| |||| |||||||||| |||| | |||||
Sbjct 464012 GCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 463961
Score = 210 bits (232), Expect = 4e-52
Identities = 227/292 (78%), Gaps = 18/292 (6%)
Strand=Plus/Minus
Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61
|||||||||||| | | ||| || |||||||||||||||||||||||| |||||| ||
Sbjct 493323 TACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATTG 493266
Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 493265 CCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAG 493206
Query 122 AACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT-------- 169
|||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 493205 AACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTGG 493146
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCA 226
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 493145 CGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-T 493087
Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| ||||| ||| || | |||||||||| |||| | |||||
Sbjct 493086 GCCGGCGGATAGCAATGTCATTTTGAGTGGGGATAAATCATTTGTATACGAC 493035
Score = 190 bits (210), Expect = 3e-46
Identities = 172/211 (82%), Gaps = 14/211 (7%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 454340 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 454283
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 454282 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 454223
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 454222 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 454163
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG 199
|| | | ||||| |||||||| |||||||
Sbjct 454162 GCGTCGCTGAACCATAGCAGGCTAGCAACGG 454132
>seq36
Length=471
Score = 172 bits (190), Expect = 9e-41
Identities = 192/250 (77%), Gaps = 16/250 (6%)
Strand=Plus/Plus
Query 44 CTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTA 103
|||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1 CTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTA 60
Query 104 AGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACG 160
||||||||||||||| |||||| ||||| |||| | || |||| ||| |||||||
Sbjct 61 AGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACG 120
Query 161 AAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGG 210
||| |||| | || | | ||||| |||||||| ||||||| || ||||
Sbjct 121 AATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCTCTTGGCGG 180
Query 211 AA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTT 268
|| || ||| ||| || ||||||| ||||| ||| || | |||||||||| ||
Sbjct 181 AAAGGCCTTGGGTGCT-TGCCGGCGGATAGCAATGTCATTTTGAGTGGGGATAAATCATT 239
Query 269 TGCAGACGAC 278
|| | |||||
Sbjct 240 TGTATACGAC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199396864
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