Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738595.1_202016-09- 21] 299 sequences; 12,513,145 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12 295 1e-77 >seq12 Length=1053325 Score = 295 bits (326), Expect = 1e-77 Identities = 234/295 (79%), Gaps = 47/295 (16%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 448505 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 448564 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448565 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACA-------- 448616 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||| |||||||| Sbjct 448617 ---------------------------------------ATCAAAAAGCAATGTCGCTAT 448637 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448638 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 448697 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448698 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 448752 Score = 203 bits (224), Expect = 6e-50 Identities = 115/117 (98%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486695 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 486754 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486755 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 486811 Score = 156 bits (172), Expect = 7e-36 Identities = 101/111 (91%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 486518 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 486577 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486578 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 486628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397445344