Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738595.1_202016-09- 21] 299 sequences; 12,513,145 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12 223 6e-56 >seq12 Length=1053325 Score = 223 bits (246), Expect = 6e-56 Identities = 230/292 (79%), Gaps = 17/292 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 486520 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 486463 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 486462 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 486403 Query 121 GAACGGGGTGATTCTCT-CCT-GCACATCGTAGTCGGATACGAAT-AGGCTT-------- 169 ||||| ||||||||| | ||| |||| |||| |||||||||| |||| | Sbjct 486402 GAACGCGGTGATTCTTTGCCTCACACAAGGTAGATGGATACGAATAAGGCGTCCTTGTGA 486343 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCA 226 || | | | ||| |||| |||||||||||| || |||||| || ||| ||| Sbjct 486342 CGCCGCTGGACCATAGCGGGCCGGCAACGGTGCTCTTGGCGGAAAGGCCTTGGGTGCT-T 486284 Query 227 GCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||||||| ||||| ||| || | |||||||||| |||| | ||||| Sbjct 486283 GCCGGCGGATAGCAATGTCATTTTGAGTGGGGATAAATCATTTGTATACGAC 486232 Score = 221 bits (244), Expect = 2e-55 Identities = 230/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 448507 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 448450 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 448449 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 448390 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 448389 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 448330 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 448329 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 448271 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| |||| | ||||| Sbjct 448270 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 448218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197627136