Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001738715.1_202016-09- 21] 124 sequences; 11,884,406 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq5 145 6e-30 seq10 116 3e-21 seq9 116 3e-21 >seq5 Length=559062 Score = 145 bits (160), Expect = 6e-30 Identities = 395/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Minus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 294554 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 294495 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || |||||||| || Sbjct 294494 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAAGATATCA 294435 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 294434 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 294375 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || ||| || ||||| ||||| | ||| || | | |||||||| | || Sbjct 294374 ACATAACGGGCGGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 294315 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 294314 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 294255 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 294254 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 294195 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 294194 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 294135 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 294134 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 294075 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 294074 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 294015 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 294014 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 293955 Query 66920 AAGTA 66924 || || Sbjct 293954 AAATA 293950 >seq10 Length=736394 Score = 116 bits (128), Expect = 3e-21 Identities = 345/527 (65%), Gaps = 15/527 (3%) Strand=Plus/Plus Query 61108 GCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG 61167 || |||||||| |||||||| | || || | |||||||| || || || |||||||| Sbjct 391330 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGG 391389 Query 61168 GAGCGTTTATCGAGCGGTGAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGC 61223 | | || || |||| | | ||||||| || | || || || || Sbjct 391390 AACAACAGAATGAACGA-GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGC 391448 Query 61224 CGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGT 61283 |||||| |||||||| || ||||| || || | ||| ||| | || || ||| | Sbjct 391449 CGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAAT 391508 Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343 | ||||| |||||||||| ||||| || || || ||| | ||||| || | Sbjct 391509 TCCAGAGGCAAAGAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAAC 391568 Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403 ||| | | |||||||| ||||||| ||| | ||| ||||| |||||||| Sbjct 391569 TTACTCCTTGTTGATCGATACTTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAA 391628 Query 61404 TGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA 61459 |||||| | || || || | |||||| ||| || || ||||| || | |||| Sbjct 391629 TGCCATTCACACCATCCCAGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGA 391684 Query 61460 -TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 ||| | ||| || ||||||||| || | | || ||||| | || ||| Sbjct 391685 TTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGT 391743 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 || |||||| || || |||||| | || || |||||||| || | || | |||||| Sbjct 391744 GTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCC 391803 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 ||| | ||||| ||| || ||||| | | ||||| || |||| Sbjct 391804 GGTTTAACCTTTTCCAACGAATTGATCTGTAGAGACGAAGGTTTGCA 391850 >seq9 Length=441424 Score = 116 bits (128), Expect = 3e-21 Identities = 415/644 (64%), Gaps = 10/644 (2%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 ||||||| || ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 237546 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 237605 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || || || | || || |||| | | |||| || || ||||| || Sbjct 237606 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 237665 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 ||||||||||| |||| | | | |||||| | || | ||| ||||| ||||| Sbjct 237666 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 237725 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || ||| ||||| ||||| | ||| || | | |||||| || | || Sbjct 237726 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 237785 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 ||||| || |||| || ||| | || || | || | || ||||||| |||| Sbjct 237786 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 237845 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | || || || || ||| Sbjct 237846 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 237905 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 ||| |||| |||| | | | | |||||| | ||| || | || || | || | Sbjct 237906 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 237965 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | |||||| || ||||| ||||| |||| || |||| | Sbjct 237966 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 238025 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 |||| || || | ||||| || || || | |||| ||||| | | | ||||| Sbjct 238026 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 238084 Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| ||| || | || || ||||| || || ||||| ||||||| Sbjct 238085 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 238140 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || || |||| || | |||||| || | | |||||||||| Sbjct 238141 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 238184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567399175360