Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740545.1_202016-09-
21] 192 sequences; 12,008,617 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq12 286 6e-75
seq176 158 2e-36
>seq12
Length=1050418
Score = 286 bits (316), Expect = 6e-75
Identities = 231/295 (78%), Gaps = 52/295 (18%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||
Sbjct 447838 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 447897
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447898 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 447957
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||| ||
Sbjct 447958 ATTCTG----------------------------------------------------AT 447965
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 447966 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 448025
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 448026 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 448080
Score = 203 bits (224), Expect = 6e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485950 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 486009
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486010 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 486066
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 486226 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 486285
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 486286 ATAGGCCACACTTTCATGGTTTGTATTCAC 486315
>seq176
Length=813
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 60
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 61 ATAGGCCACACTTTCATGGTTTGTATTCAC 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854398359552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |