Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001740805.1_202016-09- 21] 249 sequences; 12,189,529 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq12 590 2e-166 seq235 143 9e-32 >seq12 Length=1052274 Score = 590 bits (654), Expect = 2e-166 Identities = 362/382 (95%), Gaps = 5/382 (1%) Strand=Plus/Plus Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222 |||| |||| ||||||||||||| |||||||| |||| |||| |||||||||||||||| Sbjct 450482 TGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCAC 450541 Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGAC 281 | |||||||| |||||||||||||||||| ||||| | ||| ||||||| ||| || Sbjct 450542 TGGCGCCGAA---GCTCCCACTTATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAAC 450597 Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 450598 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGG 450657 Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450658 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 450717 Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450718 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 450777 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450778 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 450837 Query 522 ATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||| Sbjct 450838 ATTGCGTCAACATCACTTTCTG 450859 Score = 138 bits (152), Expect = 4e-30 Identities = 87/94 (93%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 488264 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 488323 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||| ||||||||||||||||||| || Sbjct 488324 GTTTAACAGATATGCCGCCCCAGCCAAACTCTCC 488357 Score = 107 bits (118), Expect = 6e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 450389 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 450448 Query 67 GTTTAACAGATGTG 80 ||||||||||| || Sbjct 450449 GTTTAACAGATTTG 450462 >seq235 Length=889 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 149 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 208 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||| || Sbjct 209 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635195928352