Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741805.1_202016-09-
21] 247 sequences; 11,958,749 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq12 470 3e-130
seq241 158 2e-36
>seq12
Length=1051125
Score = 470 bits (520), Expect = 3e-130
Identities = 281/295 (95%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| |||||| |||| || || ||||||||||||||||||||||||||||||
Sbjct 453639 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 453698
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453699 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 453758
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 453759 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 453818
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453819 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 453878
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 453879 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 453933
Score = 203 bits (224), Expect = 6e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444661 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 444720
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444721 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 444777
Score = 203 bits (224), Expect = 6e-50
Identities = 115/117 (98%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482647 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 482706
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482707 CTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 482763
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 482923 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 482982
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 482983 ATAGGCCACACTTTCATGGTTTGTATTCAC 483012
>seq241
Length=860
Score = 158 bits (174), Expect = 2e-36
Identities = 89/90 (99%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 860 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCG 801
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 800 ATAGGCCACACTTTCATGGTTTGTATTCAC 771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854397889632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |