Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001741805.1_202016-09-
21] 247 sequences; 11,958,749 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq12 782 0.0
seq241 143 9e-32
>seq12
Length=1051125
Score = 782 bits (866), Expect = 0.0
Identities = 502/541 (93%), Gaps = 9/541 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 444809 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 444868
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 444869 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 444928
Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183
|||| |||| ||||||| || || |||| ||| |||| |||| ||||||||||
Sbjct 444929 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 444987
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
||| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||
Sbjct 444988 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 445044
Query 244 TTATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||
Sbjct 445045 TTATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 445103
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 445104 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 445163
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445164 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 445223
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445224 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 445283
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445284 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 445343
Query 543 G 543
|
Sbjct 445344 G 445344
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 482795 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 482854
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 482855 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 482888
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 483044 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 483103
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 483104 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 483137
Score = 141 bits (156), Expect = 3e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 453965 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 454024
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||||||||||||||||||||||||||||||
Sbjct 454025 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 454055
>seq241
Length=860
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 739 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 680
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 679 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635195961056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |