Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F001983315.1_202017-02- 02] 236 sequences; 12,005,589 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq233 390 2e-106 seq232 390 2e-106 seq190 390 2e-106 seq183 390 2e-106 seq181 390 2e-106 seq150 390 2e-106 seq149 383 3e-104 seq177 336 4e-90 >seq233 Length=2579 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 1188 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 1129 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1128 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1069 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 1068 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 1011 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 1010 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 951 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 950 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 891 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 890 GCCCTTTGTA 881 >seq232 Length=2676 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 2228 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 2169 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2168 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2109 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 2108 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 2051 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 2050 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1991 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 1990 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1931 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 1930 GCCCTTTGTA 1921 >seq190 Length=6483 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 1089 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 1030 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1029 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 970 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 969 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 912 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 911 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 852 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 851 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 792 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 791 GCCCTTTGTA 782 >seq183 Length=7120 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 1358 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 1299 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1298 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1239 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 1238 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 1181 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 1180 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1121 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 1120 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1061 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 1060 GCCCTTTGTA 1051 >seq181 Length=7211 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 4412 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 4471 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4472 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4531 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 4532 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 4589 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 4590 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 4649 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 4650 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4709 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 4710 GCCCTTTGTA 4719 >seq150 Length=10557 Score = 390 bits (432), Expect = 2e-106 Identities = 274/310 (88%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 4528 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 4469 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4468 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4409 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||||| Sbjct 4408 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCC 4351 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 4350 GAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 4291 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 4290 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4231 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 4230 GCCCTTTGTA 4221 >seq149 Length=10860 Score = 383 bits (424), Expect = 3e-104 Identities = 274/312 (88%), Gaps = 5/312 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || || || ||| | |||||||| Sbjct 7469 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTTGCTGGTTATCCACTTCTTAG 7528 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7529 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 7588 Query 139 AGATGTTCTGGGCCGCACGCGCGC--TACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||| |||||||||||||||||||| ||||||||| |||||| ||||| | ||||||| Sbjct 7589 AGACGTTCTGGGCCGCACGCGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGG 7646 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| |||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||| Sbjct 7647 CCGAGAGGTCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTA 7706 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct 7707 TTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCC 7766 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 7767 CTGCCCTTTGTA 7778 >seq177 Length=7690 Score = 336 bits (372), Expect = 4e-90 Identities = 269/313 (86%), Gaps = 11/313 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| || || ||| || | || |||||||| Sbjct 581 GAACGAGACCTTAACCTACTAAATAGTGGTGCTAGCATTGCTGGTTATCCA-CTTCTTAG 523 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAG-TTTGAGGCAAT-AACAGGTCTGTGATGCCC 136 ||| |||||||| | |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 522 AGG-ACTATCGGTTTCAAGCCGATGGAAGGTTTGAGGCAATTAACAGGTCTGTGATGCCC 464 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||| ||||||||||||||||||||||||||||| |||||| ||||| | ||||||| Sbjct 463 TTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGT--CTAACCTTGG 406 Query 197 CCGGAAGGTCTGGGTAATCTT-GTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||| |||||| ||||||||| || |||||| ||||||||||||||||||||||| ||| Sbjct 405 CCGAGAGGTCTTGGTAATCTTGGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG-TATT 347 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||||||||||||||||| || |||||||||||| ||||||| |||||||||||||| Sbjct 346 ATTGCTCTTCAACGAGGGATTCCTAGTAAGCGCAAGTCATCA--TTGCGTTGATTACGTC 289 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 288 CCTGCCCTTTGTA 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197764608