Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1146 147 3e-33 seq1261 129 9e-28 seq1113 127 3e-27 seq963 127 3e-27 seq447 127 3e-27 seq1268 113 7e-23 seq270 102 1e-19 seq1214 84.2 3e-14 >seq1146 Length=123 Score = 147 bits (162), Expect = 3e-33 Identities = 109/125 (87%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 101 CGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC 159 ||| | | ||||| ||||||||| ||||| ||||||||||| |||||||| || | | Sbjct 123 CGACGGAGTTTCACAAGATTACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCC 66 Query 160 ATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 65 GTCCGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCT 6 Query 220 CAAAC 224 ||||| Sbjct 5 CAAAC 1 >seq1261 Length=123 Score = 129 bits (142), Expect = 9e-28 Identities = 105/125 (84%), Gaps = 3/125 (2%) Strand=Plus/Plus Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGAT 118 |||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||| Sbjct 1 CCTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGAT 60 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 | || ||||| ||||||||||| |||||||| || | | |||||||||||||||||| Sbjct 61 TGCCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGC 118 Query 179 GGCCC 183 ||||| Sbjct 119 GGCCC 123 >seq1113 Length=123 Score = 127 bits (140), Expect = 3e-27 Identities = 104/124 (84%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124 |||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||||||| Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 | ||| ||||||||||| |||||||| || | | |||||||||||||||||||||||| Sbjct 61 GCCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118 Query 185 GAAC 188 |||| Sbjct 119 GAAC 122 >seq963 Length=123 Score = 127 bits (140), Expect = 3e-27 Identities = 104/124 (84%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124 |||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||||||| Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 | ||| ||||||||||| |||||||| || | | |||||||||||||||||||||||| Sbjct 61 GGCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118 Query 185 GAAC 188 |||| Sbjct 119 GAAC 122 >seq447 Length=123 Score = 127 bits (140), Expect = 3e-27 Identities = 104/124 (84%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124 |||||| ||| |||| ||||| |||||||||| ||||| | | ||||| ||||||||| Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 | ||| ||||||||||| |||||||| || | | |||||||||||||||||||||||| Sbjct 61 GTCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118 Query 185 GAAC 188 |||| Sbjct 119 GAAC 122 >seq1268 Length=119 Score = 113 bits (124), Expect = 7e-23 Identities = 64/65 (98%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 GTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 60 Query 224 CTTCC 228 ||||| Sbjct 61 CTTCC 65 >seq270 Length=123 Score = 102 bits (112), Expect = 1e-19 Identities = 72/80 (90%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 44 GTACAAAGGGCAGGGACGGAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 101 Query 61 CTCGTTGAAGACCAACAATT 80 ||||||||||| ||| |||| Sbjct 102 CTCGTTGAAGAGCAATAATT 121 >seq1214 Length=123 Score = 84.2 bits (92), Expect = 3e-14 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||| Sbjct 65 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAATT 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751990646060