Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02-
08] 1,284 sequences; 11,561,149 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1146 147 3e-33
seq1261 129 9e-28
seq1113 127 3e-27
seq963 127 3e-27
seq447 127 3e-27
seq1268 113 7e-23
seq270 102 1e-19
seq1214 84.2 3e-14
>seq1146
Length=123
Score = 147 bits (162), Expect = 3e-33
Identities = 109/125 (87%), Gaps = 3/125 (2%)
Strand=Plus/Minus
Query 101 CGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC 159
||| | | ||||| ||||||||| ||||| ||||||||||| |||||||| || | |
Sbjct 123 CGACGGAGTTTCACAAGATTACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCC 66
Query 160 ATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 219
|| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 65 GTCCGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCT 6
Query 220 CAAAC 224
|||||
Sbjct 5 CAAAC 1
>seq1261
Length=123
Score = 129 bits (142), Expect = 9e-28
Identities = 105/125 (84%), Gaps = 3/125 (2%)
Strand=Plus/Plus
Query 60 CCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGAT 118
|||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||
Sbjct 1 CCTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGAT 60
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
| || ||||| ||||||||||| |||||||| || | | ||||||||||||||||||
Sbjct 61 TGCCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGC 118
Query 179 GGCCC 183
|||||
Sbjct 119 GGCCC 123
>seq1113
Length=123
Score = 127 bits (140), Expect = 3e-27
Identities = 104/124 (84%), Gaps = 3/124 (2%)
Strand=Plus/Plus
Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124
|||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||||||
Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60
Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184
| ||| ||||||||||| |||||||| || | | ||||||||||||||||||||||||
Sbjct 61 GCCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118
Query 185 GAAC 188
||||
Sbjct 119 GAAC 122
>seq963
Length=123
Score = 127 bits (140), Expect = 3e-27
Identities = 104/124 (84%), Gaps = 3/124 (2%)
Strand=Plus/Plus
Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124
|||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||||||
Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60
Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184
| ||| ||||||||||| |||||||| || | | ||||||||||||||||||||||||
Sbjct 61 GGCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118
Query 185 GAAC 188
||||
Sbjct 119 GAAC 122
>seq447
Length=123
Score = 127 bits (140), Expect = 3e-27
Identities = 104/124 (84%), Gaps = 3/124 (2%)
Strand=Plus/Plus
Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCG 124
|||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||||||
Sbjct 1 TGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAA 60
Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184
| ||| ||||||||||| |||||||| || | | ||||||||||||||||||||||||
Sbjct 61 GTCCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCA 118
Query 185 GAAC 188
||||
Sbjct 119 GAAC 122
>seq1268
Length=119
Score = 113 bits (124), Expect = 7e-23
Identities = 64/65 (98%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 GTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 60
Query 224 CTTCC 228
|||||
Sbjct 61 CTTCC 65
>seq270
Length=123
Score = 102 bits (112), Expect = 1e-19
Identities = 72/80 (90%), Gaps = 2/80 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||| | ||||||| ||| |||||||| |||||||||||||| |||
Sbjct 44 GTACAAAGGGCAGGGACGGAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 101
Query 61 CTCGTTGAAGACCAACAATT 80
||||||||||| ||| ||||
Sbjct 102 CTCGTTGAAGAGCAATAATT 121
>seq1214
Length=123
Score = 84.2 bits (92), Expect = 3e-14
Identities = 54/58 (93%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58
|||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||||
Sbjct 65 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAATT 121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751990646060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |