Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1249 154 8e-36 seq1175 154 8e-36 seq537 154 8e-36 seq1271 150 1e-34 seq1038 132 3e-29 seq242 114 7e-24 seq241 114 7e-24 seq902 100 2e-19 seq382 98.7 6e-19 >seq1249 Length=123 Score = 154 bits (170), Expect = 8e-36 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | ||| | ||| Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACTCCACCC 68 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123 >seq1175 Length=123 Score = 154 bits (170), Expect = 8e-36 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | ||| | ||| Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACCCCACCC 68 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123 >seq537 Length=123 Score = 154 bits (170), Expect = 8e-36 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | ||| | ||| Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACGCCACCC 68 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123 >seq1271 Length=123 Score = 150 bits (166), Expect = 1e-34 Identities = 101/113 (89%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | | || | ||| Sbjct 113 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAACCACCACCC 54 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCT 113 |||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 53 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCT 1 >seq1038 Length=123 Score = 132 bits (146), Expect = 3e-29 Identities = 88/98 (90%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | |||| | ||| Sbjct 26 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGGGGGTCATTAAAAAAACACCACCC 85 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98 |||||||||||||||||||||| ||||||||||||||| Sbjct 86 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 123 >seq242 Length=123 Score = 114 bits (126), Expect = 7e-24 Identities = 80/91 (88%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||| |||||| | |||| | | |||| | ||| Sbjct 33 GAACCCAAAGACTTTGATTTCTCGTAAGGGGCCGAGTGGGTCATTAAAAAAACACCACCC 92 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGA 91 |||||||||||||||||||||| |||||||| Sbjct 93 GATCCCTAGTCGGCATAGTTTATGGTTAAGA 123 >seq241 Length=123 Score = 114 bits (126), Expect = 7e-24 Identities = 80/91 (88%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||| |||||| | |||| | | |||| | ||| Sbjct 33 GAACCCAAAGACTTTGATTTCTCGTAAGGCGCCGAGTGGGTCATTAAAAAAACACCACCC 92 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGA 91 |||||||||||||||||||||| |||||||| Sbjct 93 GATCCCTAGTCGGCATAGTTTATGGTTAAGA 123 >seq902 Length=108 Score = 100 bits (110), Expect = 2e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 105 CCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 46 >seq382 Length=123 Score = 98.7 bits (108), Expect = 6e-19 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 12 AACACCACCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGGATCTGATCA 71 Query 111 TCTTCGA 117 ||||||| Sbjct 72 TCTTCGA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396648760