Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02-
08] 1,284 sequences; 11,561,149 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1249 154 8e-36
seq1175 154 8e-36
seq537 154 8e-36
seq1271 150 1e-34
seq1038 132 3e-29
seq242 114 7e-24
seq241 114 7e-24
seq902 100 2e-19
seq382 98.7 6e-19
>seq1249
Length=123
Score = 154 bits (170), Expect = 8e-36
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | ||| | |||
Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACTCCACCC 68
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123
>seq1175
Length=123
Score = 154 bits (170), Expect = 8e-36
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | ||| | |||
Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACCCCACCC 68
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123
>seq537
Length=123
Score = 154 bits (170), Expect = 8e-36
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | ||| | |||
Sbjct 9 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACGCCACCC 68
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 69 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTC 123
>seq1271
Length=123
Score = 150 bits (166), Expect = 1e-34
Identities = 101/113 (89%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | | || | |||
Sbjct 113 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAACCACCACCC 54
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCT 113
|||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 53 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCT 1
>seq1038
Length=123
Score = 132 bits (146), Expect = 3e-29
Identities = 88/98 (90%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | |||| | |||
Sbjct 26 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGGGGGTCATTAAAAAAACACCACCC 85
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGAC 98
|||||||||||||||||||||| |||||||||||||||
Sbjct 86 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGAC 123
>seq242
Length=123
Score = 114 bits (126), Expect = 7e-24
Identities = 80/91 (88%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||| |||||| | |||| | | |||| | |||
Sbjct 33 GAACCCAAAGACTTTGATTTCTCGTAAGGGGCCGAGTGGGTCATTAAAAAAACACCACCC 92
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGA 91
|||||||||||||||||||||| ||||||||
Sbjct 93 GATCCCTAGTCGGCATAGTTTATGGTTAAGA 123
>seq241
Length=123
Score = 114 bits (126), Expect = 7e-24
Identities = 80/91 (88%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||||||| |||||| | |||| | | |||| | |||
Sbjct 33 GAACCCAAAGACTTTGATTTCTCGTAAGGCGCCGAGTGGGTCATTAAAAAAACACCACCC 92
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGA 91
|||||||||||||||||||||| ||||||||
Sbjct 93 GATCCCTAGTCGGCATAGTTTATGGTTAAGA 123
>seq902
Length=108
Score = 100 bits (110), Expect = 2e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 105 CCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 46
>seq382
Length=123
Score = 98.7 bits (108), Expect = 6e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||| | ||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 12 AACACCACCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGGATCTGATCA 71
Query 111 TCTTCGA 117
|||||||
Sbjct 72 TCTTCGA 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278396648760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |