Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1283 178 2e-42 seq765 178 2e-42 seq1204 174 3e-41 seq1183 172 1e-40 seq1172 172 1e-40 seq967 172 1e-40 seq559 168 1e-39 seq312 165 1e-38 seq1163 136 7e-30 seq254 136 7e-30 seq1027 132 9e-29 seq801 123 5e-26 >seq1283 Length=123 Score = 178 bits (196), Expect = 2e-42 Identities = 113/123 (92%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 116 CGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175 |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1 CGAATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAG 60 Query 176 GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235 | || |||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 61 GGCCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGA 120 Query 236 AAT 238 ||| Sbjct 121 AAT 123 >seq765 Length=123 Score = 178 bits (196), Expect = 2e-42 Identities = 113/123 (92%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 116 CGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175 |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1 CGAATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAG 60 Query 176 GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235 | || |||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 61 GCCCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGA 120 Query 236 AAT 238 ||| Sbjct 121 AAT 123 >seq1204 Length=123 Score = 174 bits (192), Expect = 3e-41 Identities = 113/123 (92%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 87 AATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATAG 145 |||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 1 AATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAG 60 Query 146 GACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCG 205 | ||| ||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 61 GTCGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTCG 120 Query 206 GGG 208 ||| Sbjct 121 GGG 123 >seq1183 Length=123 Score = 172 bits (190), Expect = 1e-40 Identities = 112/123 (91%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 172 CTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAG 231 |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 123 CTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAG 64 Query 232 GTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTT 291 | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct 63 GGGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTT 4 Query 292 CAT 294 ||| Sbjct 3 CAT 1 >seq1172 Length=123 Score = 172 bits (190), Expect = 1e-40 Identities = 112/123 (91%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 172 CTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAG 231 |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 123 CTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAG 64 Query 232 GTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTT 291 | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct 63 GAGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTT 4 Query 292 CAT 294 ||| Sbjct 3 CAT 1 >seq967 Length=123 Score = 172 bits (190), Expect = 1e-40 Identities = 112/123 (91%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 172 CTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAG 231 |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 123 CTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAG 64 Query 232 GTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTT 291 | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| Sbjct 63 GCGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTT 4 Query 292 CAT 294 ||| Sbjct 3 CAT 1 >seq559 Length=117 Score = 168 bits (186), Expect = 1e-39 Identities = 105/113 (93%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 113 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 54 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCAT 294 |||||||||||||||||||||||||||||||| || ||||||| |||||||| Sbjct 53 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCAT 1 >seq312 Length=123 Score = 165 bits (182), Expect = 1e-38 Identities = 111/123 (90%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 95 TGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCG 153 |||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| | Sbjct 1 TGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAGGACGTTTG 60 Query 154 GTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 | |||||||||||||||||||||||| |||||||||||||||||| |||||||| || Sbjct 61 GGTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATC 120 Query 214 AGT 216 ||| Sbjct 121 AGT 123 >seq1163 Length=123 Score = 136 bits (150), Expect = 7e-30 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 97 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGAGTTCAAAGCAGGCGTATTGCTCGA 38 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGT 150 ||| |||||||||||||||||||||||||||| Sbjct 37 ATATATTAGCATGGAATAATAGAATAGGACGT 6 >seq254 Length=123 Score = 136 bits (150), Expect = 7e-30 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 97 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCGTATTGCTCGA 38 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGT 150 ||| |||||||||||||||||||||||||||| Sbjct 37 ATATATTAGCATGGAATAATAGAATAGGACGT 6 >seq1027 Length=114 Score = 132 bits (146), Expect = 9e-29 Identities = 83/88 (94%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 88 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGA 29 Query 119 ATACATTAGCATGGAATAATAGAATAGG 146 ||| |||||||||||||||||||||||| Sbjct 28 ATATATTAGCATGGAATAATAGAATAGG 1 >seq801 Length=101 Score = 123 bits (136), Expect = 5e-26 Identities = 79/85 (93%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 234 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| Sbjct 1 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCA 60 Query 294 TTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| |||||||||||||||| Sbjct 61 TTAATCA-AGAACGAAAGTTAGGGG 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915188248832