Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1074 179 6e-43 seq1140 172 9e-41 seq545 172 9e-41 seq377 156 7e-36 seq1268 152 8e-35 seq932 152 8e-35 seq1181 141 1e-31 seq1146 127 3e-27 seq438 107 3e-21 >seq1074 Length=123 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||||||| |||||| ||||||||||||||| ||| Sbjct 6 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCCCCA 65 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| Sbjct 66 ACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 122 >seq1140 Length=123 Score = 172 bits (190), Expect = 9e-41 Identities = 106/113 (94%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||| Sbjct 113 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCGCTCCACCA 54 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||||||||||| | ||||||||||||||| |||||| Sbjct 53 ACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATC 1 >seq545 Length=123 Score = 172 bits (190), Expect = 9e-41 Identities = 106/113 (94%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||||| Sbjct 113 CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCCCTCCACCA 54 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 |||||||||||||||||||||||||||| | ||||||||||||||| |||||| Sbjct 53 ACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAAGAGCTCTCAATC 1 >seq377 Length=123 Score = 156 bits (172), Expect = 7e-36 Identities = 95/101 (94%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 123 GGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATG 64 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||||||| | ||||||||||||||| |||||||||| Sbjct 63 CCCCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 23 >seq1268 Length=119 Score = 152 bits (168), Expect = 8e-35 Identities = 92/97 (95%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 GTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 60 Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||| |||| ||| || ||||||||||||||||| Sbjct 61 CTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAG 97 >seq932 Length=123 Score = 152 bits (168), Expect = 8e-35 Identities = 93/99 (94%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 160 TCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 219 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1 TCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCA 60 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||||| | ||||||||||||||| |||||||||| Sbjct 61 CAACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 99 >seq1181 Length=123 Score = 141 bits (156), Expect = 1e-31 Identities = 84/88 (95%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||| Sbjct 36 CTATTTAGTAGGTTAAGGTCTCGTTCTTTATCGCAATTAAGCAGACAAATCACTCCACCA 95 Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229 |||||||||||||||||||||||||||| Sbjct 96 ACTAAGAACGGCCATGCACCACCACCCA 123 >seq1146 Length=123 Score = 127 bits (140), Expect = 3e-27 Identities = 75/78 (96%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 78 ACTCGCTGGCTCCGTCCGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 19 Query 62 CCTGTTATTGCCTCAAAC 79 |||||||||||||||||| Sbjct 18 CCTGTTATTGCCTCAAAC 1 >seq438 Length=123 Score = 107 bits (118), Expect = 3e-21 Identities = 101/126 (80%), Gaps = 6/126 (5%) Strand=Plus/Minus Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---AGCCACCAACCATAGT 133 ||||||||| |||| ||| || ||||||||||||||||| | ||| ||| || | Sbjct 123 AACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATAACCAGCAA--ATGCT 66 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | |||||||| |||||||||||||||||||||||| |||||| ||||||||||| Sbjct 65 AGCCCCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCA 7 Query 194 CTCCAC 199 |||||| Sbjct 6 CTCCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796790088804