Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1214 104 1e-20 seq270 95.1 7e-18 seq1201 82.4 5e-14 >seq1214 Length=123 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || |||||||||||||||||||||||||||||||| Sbjct 25 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGACG 82 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 83 TAAT-CAACGCAAGCT 97 >seq270 Length=123 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||||||| |||||||||||||||||||| Sbjct 4 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 61 Query 109 TAATACAACGCAAGCT 124 ||| ||||||||||| Sbjct 62 GAAT-CAACGCAAGCT 76 >seq1201 Length=123 Score = 82.4 bits (90), Expect = 5e-14 Identities = 58/64 (91%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||| |||||||||| || |||||| || ||||||||||| |||||||||||||||||||| Sbjct 65 CTCCCTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 8 Query 109 TAAT 112 |||| Sbjct 7 TAAT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796379120