Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1163 122 1e-25 seq254 122 1e-25 seq1027 118 1e-24 seq1204 109 7e-22 seq312 100 3e-19 seq1283 82.4 9e-14 seq765 82.4 9e-14 >seq1163 Length=123 Score = 122 bits (134), Expect = 1e-25 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 31 ACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTC 89 |||||||||||||||||||||||||||| |||||| || || ||||||||||||| ||| Sbjct 6 ACGTCCTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACTCTC 65 Query 90 TAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 ||||||| |||| |||||||||||||||| Sbjct 66 TAATTTTTTCAAAGTAAAAGTCCTGGTTC 94 >seq254 Length=123 Score = 122 bits (134), Expect = 1e-25 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 31 ACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTC 89 |||||||||||||||||||||||||||| |||||| || || ||||||||||||| ||| Sbjct 6 ACGTCCTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACGCTC 65 Query 90 TAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 ||||||| |||| |||||||||||||||| Sbjct 66 TAATTTTTTCAAAGTAAAAGTCCTGGTTC 94 >seq1027 Length=114 Score = 118 bits (130), Expect = 1e-24 Identities = 78/85 (92%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 35 CCTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAAT 93 |||||||||||||||||||||||| |||||| || || ||||||||||||||||||||| Sbjct 1 CCTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACACTCTAAT 60 Query 94 TTTCTCAAGGTAAAAGTCCTGGTTC 118 ||| |||| |||||||||||||||| Sbjct 61 TTTTTCAAAGTAAAAGTCCTGGTTC 85 >seq1204 Length=123 Score = 109 bits (120), Expect = 7e-22 Identities = 79/90 (88%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||| Sbjct 90 CTAGAAACCAACAAAATAGAACCAAACGACCTATTCTATTATTCCATGCTAATATATTCG 31 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATT 94 || || |||||||||||||||||||||| Sbjct 30 AGCAATACGCCTGCTTTGAACACTCTAATT 1 >seq312 Length=123 Score = 100 bits (110), Expect = 3e-19 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 82 CTAGAAACCAACAAAATAGACCCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 23 Query 66 GGC-GTAAGCCTGCTTTGAACA 86 || || |||||||||||||| Sbjct 22 AGCAATACGCCTGCTTTGAACA 1 >seq1283 Length=123 Score = 82.4 bits (90), Expect = 9e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 60 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1 >seq765 Length=123 Score = 82.4 bits (90), Expect = 9e-14 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 60 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192596456