Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1283 149 6e-34 seq765 149 6e-34 seq1204 145 8e-33 seq254 140 3e-31 seq312 138 1e-30 seq1163 134 1e-29 seq1027 127 2e-27 seq559 95.1 1e-17 seq1183 93.3 4e-17 seq1172 93.3 4e-17 seq967 93.3 4e-17 >seq1283 Length=123 Score = 149 bits (164), Expect = 6e-34 Identities = 108/124 (87%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 55 CGAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAG 114 |||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 1 CGAATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAG 60 Query 115 GACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTG 174 | || ||||||||| |||| ||| |||||||| ||||||||||||||||| ||||| Sbjct 61 GGCC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTG 119 Query 175 AAAT 178 |||| Sbjct 120 AAAT 123 >seq765 Length=123 Score = 149 bits (164), Expect = 6e-34 Identities = 108/124 (87%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 55 CGAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAG 114 |||||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 1 CGAATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAG 60 Query 115 GACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTG 174 | || ||||||||| |||| ||| |||||||| ||||||||||||||||| ||||| Sbjct 61 G-CCCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTG 119 Query 175 AAAT 178 |||| Sbjct 120 AAAT 123 >seq1204 Length=123 Score = 145 bits (160), Expect = 8e-33 Identities = 108/124 (87%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 26 AATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATGGAATAATAGAATAG 84 |||||||| ||||||||||||| | ||||||||||| |||| |||||||||||||||||| Sbjct 1 AATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAG 60 Query 85 GACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTC 144 | ||| ||||||||||||| ||||||||||||| ||||||||| |||| ||| ||| Sbjct 61 GTCGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATGATTAATAGGGACGGTC 119 Query 145 GGGG 148 |||| Sbjct 120 GGGG 123 >seq254 Length=123 Score = 140 bits (154), Expect = 3e-31 Identities = 85/89 (96%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 94 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCGTATTGCTCGAATA 35 Query 61 CATTACCATGGAATAATAGAATAGGACGT 89 |||| ||||||||||||||||||||||| Sbjct 34 TATTAGCATGGAATAATAGAATAGGACGT 6 >seq312 Length=123 Score = 138 bits (152), Expect = 1e-30 Identities = 106/123 (86%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 35 GTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGCGG 93 ||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| || Sbjct 2 GTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAGGACGTTTGG 61 Query 94 TTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTC 153 |||||||||| ||||||||||||| ||||||||| |||| ||| |||||||| || Sbjct 62 GTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATC 120 Query 154 AGT 156 ||| Sbjct 121 AGT 123 >seq1163 Length=123 Score = 134 bits (148), Expect = 1e-29 Identities = 84/89 (94%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 94 GAACCAGGACTTTTACTTTGAAAAAATTAGAGAGTTCAAAGCAGGCGTATTGCTCGAATA 35 Query 61 CATTACCATGGAATAATAGAATAGGACGT 89 |||| ||||||||||||||||||||||| Sbjct 34 TATTAGCATGGAATAATAGAATAGGACGT 6 >seq1027 Length=114 Score = 127 bits (140), Expect = 2e-27 Identities = 80/85 (94%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 85 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 26 Query 61 CATTACCATGGAATAATAGAATAGG 85 |||| ||||||||||||||||||| Sbjct 25 TATTAGCATGGAATAATAGAATAGG 1 >seq559 Length=117 Score = 95.1 bits (104), Expect = 1e-17 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 113 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 54 Query 182 TGGATTTATT 191 |||||||||| Sbjct 53 TGGATTTATT 44 >seq1183 Length=123 Score = 93.3 bits (102), Expect = 4e-17 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 111 CTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAA 170 |||||||| | |||||||| |||| ||| |||||||| ||||||||||||||||| | Sbjct 123 CTAGGACCATC-GTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 65 Query 171 GGTGAAATTCTTGGATTTATT 191 || |||||||||||||||||| Sbjct 64 GGGGAAATTCTTGGATTTATT 44 >seq1172 Length=123 Score = 93.3 bits (102), Expect = 4e-17 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 111 CTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAA 170 |||||||| | |||||||| |||| ||| |||||||| ||||||||||||||||| | Sbjct 123 CTAGGACCATC-GTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 65 Query 171 GGTGAAATTCTTGGATTTATT 191 || |||||||||||||||||| Sbjct 64 GGAGAAATTCTTGGATTTATT 44 >seq967 Length=123 Score = 93.3 bits (102), Expect = 4e-17 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 111 CTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAA 170 |||||||| | |||||||| |||| ||| |||||||| ||||||||||||||||| | Sbjct 123 CTAGGACCATC-GTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 65 Query 171 GGTGAAATTCTTGGATTTATT 191 || |||||||||||||||||| Sbjct 64 GGCGAAATTCTTGGATTTATT 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993631360