Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1261 165 2e-38 seq1146 165 2e-38 seq1113 163 5e-38 seq963 163 5e-38 seq447 163 5e-38 seq1268 158 2e-36 seq270 113 9e-23 seq438 84.2 4e-14 seq1214 82.4 1e-13 >seq1261 Length=123 Score = 165 bits (182), Expect = 2e-38 Identities = 112/125 (90%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 148 GGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT 207 |||||||||||||||||||||||| |||||| ||||| | |||||||||| |||||| Sbjct 123 GGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCCGAGAGGTCT 66 Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267 || |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 65 TGGCAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTCTTCAA 6 Query 268 CGAGG 272 ||||| Sbjct 5 CGAGG 1 >seq1146 Length=123 Score = 165 bits (182), Expect = 2e-38 Identities = 112/125 (90%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 107 GTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACA 166 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1 GTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACA 60 Query 167 CTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 | ||| |||||| ||||| | |||||||||| |||||| ||||||||||| |||||| Sbjct 61 CGGACGGAGCCAGCGAGT--CTAACCTTGGCCGAGAGGTCTTGGTAATCTTGTGAAACTC 118 Query 227 TGTCG 231 |||| Sbjct 119 CGTCG 123 >seq1113 Length=123 Score = 163 bits (180), Expect = 5e-38 Identities = 111/124 (90%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 143 GTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA 202 ||||||||||||||||||||||||||||| |||||| ||||| | |||||||||| | Sbjct 122 GTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCCGAGA 65 Query 203 GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTC 262 || || ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct 64 GGGCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTC 5 Query 263 TTCA 266 |||| Sbjct 4 TTCA 1 >seq963 Length=123 Score = 163 bits (180), Expect = 5e-38 Identities = 111/124 (90%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 143 GTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA 202 ||||||||||||||||||||||||||||| |||||| ||||| | |||||||||| | Sbjct 122 GTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCCGAGA 65 Query 203 GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTC 262 || || ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct 64 GGCCTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTC 5 Query 263 TTCA 266 |||| Sbjct 4 TTCA 1 >seq447 Length=123 Score = 163 bits (180), Expect = 5e-38 Identities = 111/124 (90%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 143 GTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA 202 ||||||||||||||||||||||||||||| |||||| ||||| | |||||||||| | Sbjct 122 GTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTCTA--ACCTTGGCCGAGA 65 Query 203 GGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTC 262 || || ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| Sbjct 64 GGACTTGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATTGCTC 5 Query 263 TTCA 266 |||| Sbjct 4 TTCA 1 >seq1268 Length=119 Score = 158 bits (174), Expect = 2e-36 Identities = 94/97 (97%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 97 CTTCTTAGAGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 38 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACAC 167 ||||||||||| ||||||||||||||||||||||||| Sbjct 37 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACAC 1 >seq270 Length=123 Score = 113 bits (124), Expect = 9e-23 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 121 AATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTC 62 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 61 CGTCCCTGCCCTTTGTA 45 >seq438 Length=123 Score = 84.2 bits (92), Expect = 4e-14 Identities = 74/91 (81%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||| ||| || || || ||| | |||||||| Sbjct 33 GAACGAGACCTTAACCTACTAAATAGTGGGGCTAGCATTTGCTGGTTATCCACTTCTTAG 92 Query 80 AGGGACTATCGG-CTCAAGCCGATGGAAGTT 109 |||||||||||| ||||||||||||||||| Sbjct 93 AGGGACTATCGGTTTCAAGCCGATGGAAGTT 123 >seq1214 Length=123 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 271 GGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 123 GGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947187837952