Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099225.1_202017-02- 08] 1,284 sequences; 11,561,149 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq340 545 7e-153 seq322 208 2e-51 seq281 203 1e-49 seq1276 163 9e-38 seq1227 163 9e-38 seq971 163 9e-38 seq1253 98.7 3e-18 seq728 87.8 5e-15 seq224 87.8 5e-15 >seq340 Length=402 Score = 545 bits (604), Expect = 7e-153 Identities = 352/379 (93%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 130 CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTAT 189 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 402 CCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTAT 343 Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCAT 249 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 342 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCCAT 283 Query 250 GCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCT 309 |||||||| |||||||||||||||| ||| ||| ||||| | | ||| |||||||||| Sbjct 282 GCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGATTTTTTATCT 225 Query 310 AATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACC 367 |||||||||| | ||||| || |||| | |||| ||||||||||||||||||||||||| Sbjct 224 AATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAATTACC 165 Query 368 ACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 || ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 164 ACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTAATGAGCCAT 105 Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 104 TCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 45 Query 486 AGCATATGACTACTGGCAG 504 ||||||||||||||||||| Sbjct 44 AGCATATGACTACTGGCAG 26 >seq322 Length=123 Score = 208 bits (230), Expect = 2e-51 Identities = 118/120 (98%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 63 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 64 CCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATC 123 >seq281 Length=123 Score = 203 bits (224), Expect = 1e-49 Identities = 117/120 (98%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCCC 63 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 64 CCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATC 123 >seq1276 Length=123 Score = 163 bits (180), Expect = 9e-38 Identities = 107/118 (91%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct 118 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTTCCT 59 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 1 >seq1227 Length=123 Score = 163 bits (180), Expect = 9e-38 Identities = 107/118 (91%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct 118 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTCCCT 59 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 1 >seq971 Length=123 Score = 163 bits (180), Expect = 9e-38 Identities = 107/118 (91%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||| ||| Sbjct 118 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTGCCT 59 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 1 >seq1253 Length=123 Score = 98.7 bits (108), Expect = 3e-18 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| ||| || | |||||||||| |||||||||||||||||| Sbjct 82 GTACTCATTCCAATTACAAGGCCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 23 Query 61 CCCCGTGTCGGGATTGGGTAAT 82 ||| | | |||||||||||| Sbjct 22 CCCTGAATTAGGATTGGGTAAT 1 >seq728 Length=123 Score = 87.8 bits (96), Expect = 5e-15 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || ||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 64 GTCCTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 5 Query 61 CCC 63 ||| Sbjct 4 CCC 2 >seq224 Length=123 Score = 87.8 bits (96), Expect = 5e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||| Sbjct 61 TACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCTC 2 Query 62 C 62 | Sbjct 1 C 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510380606464