Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099275.1_202017-02- 08] 1,218 sequences; 11,507,064 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq494 116 4e-24 seq747 113 5e-23 seq401 113 5e-23 seq1204 77.0 4e-12 seq450 75.2 1e-11 seq692 73.4 5e-11 >seq494 Length=103 Score = 116 bits (128), Expect = 4e-24 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 34 TCCTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAA 92 ||||||||||||||||||||||||| |||||| || || ||||||||||| |||||||| Sbjct 103 TCCTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGACCACTCTAA 44 Query 93 TTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||| |||| |||||||||||||||| Sbjct 43 TTTTTTCAAAGTAAAAGTCCTGGTTC 18 >seq747 Length=103 Score = 113 bits (124), Expect = 5e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 36 CTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATT 94 ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||| Sbjct 103 CTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACCCTCTAATT 44 Query 95 TTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||||||||||| Sbjct 43 TTTTCAAAGTAAAAGTCCTGGTTC 20 >seq401 Length=103 Score = 113 bits (124), Expect = 5e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 36 CTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATT 94 ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||| Sbjct 103 CTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACTCTCTAATT 44 Query 95 TTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||||||||||| Sbjct 43 TTTTCAAAGTAAAAGTCCTGGTTC 20 >seq1204 Length=103 Score = 77.0 bits (84), Expect = 4e-12 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || |||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 3 TACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCC 52 >seq450 Length=103 Score = 75.2 bits (82), Expect = 1e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1 TACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 49 >seq692 Length=103 Score = 73.4 bits (80), Expect = 5e-11 Identities = 53/60 (88%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 60 TATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||||| || || |||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 3 TATTCGAGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAGGTCCTGGTTC 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595192977012