Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099275.1_202017-02- 08] 1,218 sequences; 11,507,064 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq997 152 8e-35 seq936 132 8e-29 seq923 132 8e-29 seq1191 122 1e-25 seq676 120 5e-25 seq926 91.5 2e-16 >seq997 Length=103 Score = 152 bits (168), Expect = 8e-35 Identities = 92/97 (95%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||||||||||||||||||| |||||| |||||||||||| ||||| |||||||| Sbjct 97 ATAATTGGTTTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTCCCATCCGCTGGATT 38 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||||||||||||||||||| |||| Sbjct 37 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAA 1 >seq936 Length=103 Score = 132 bits (146), Expect = 8e-29 Identities = 94/105 (90%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 ||||||||| | | ||| || |||||||||||||||||||||||| ||||| ||||| Sbjct 1 GAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCTTTGCCG 58 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 59 CGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAG 103 >seq923 Length=103 Score = 132 bits (146), Expect = 8e-29 Identities = 94/105 (90%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| | |||| | Sbjct 1 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCGGGCATT 58 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAG 105 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 59 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAG 103 >seq1191 Length=103 Score = 122 bits (134), Expect = 1e-25 Identities = 83/92 (90%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 55 GGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 103 GGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGGCAGAATCC 44 Query 115 ATGCCAGAACGGGGTGA-TTCTCTCCTGCACA 145 |||| |||||| ||||| |||| | || |||| Sbjct 43 ATGCTAGAACGCGGTGATTTCTTTGCTCCACA 12 >seq676 Length=103 Score = 120 bits (132), Expect = 5e-25 Identities = 87/98 (89%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||| |||| |||||| | Sbjct 96 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGGCTGATCAGGCATT 39 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 ||||||||||||||||| |||||||||||||||||||| Sbjct 38 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGC 1 >seq926 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 75/89 (84%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCT 137 |||||||||||||||||||||||||||||||||||||||| |||||| || || |||| | Sbjct 2 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGCGATTTCTTT 61 Query 138 CCT--GCACATCGTAGTCGGATACGAATA 164 || |||| ||| ||||||||||| Sbjct 62 GCTCCACACAATATAGATGGATACGAATA 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819190333952