Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq610 125 1e-26 seq118 114 2e-23 seq258 100 4e-19 seq438 95.1 2e-17 seq306 93.3 6e-17 >seq610 Length=103 Score = 125 bits (138), Expect = 1e-26 Identities = 89/101 (88%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 114 AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 ||||||||| ||||| ||||||||||| |||||||| || | | || |||||||||| Sbjct 5 AAGATTACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCCGTGTAGCGCG 62 Query 174 CGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 214 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 63 CGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTAT 103 >seq118 Length=103 Score = 114 bits (126), Expect = 2e-23 Identities = 66/68 (97%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 97 TCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGCCCTGTTATTGCCTC 38 Query 221 AAACTTCC 228 |||||||| Sbjct 37 AAACTTCC 30 >seq258 Length=103 Score = 100 bits (110), Expect = 4e-19 Identities = 86/104 (83%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGC 135 |||| ||||| |||||||||| ||||| | | ||||| ||||||||| | ||| ||||| Sbjct 2 AATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAAGCCCTCTCGGC 61 Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||| || | | ||||||||||||||||||| Sbjct 62 CAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 103 >seq438 Length=1845 Score = 95.1 bits (104), Expect = 2e-17 Identities = 64/69 (93%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 280 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 223 Query 61 CTCGTTGAA 69 ||||||||| Sbjct 222 CTCGTTGAA 214 >seq306 Length=103 Score = 93.3 bits (102), Expect = 6e-17 Identities = 85/105 (81%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACC 128 || ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| || |||| Sbjct 103 GAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTCCCAAGACC 44 Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 | ||||||||||| |||||||| || | | ||||||||||||| Sbjct 43 TCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993377935