Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099285.1_202017-02- 08] 909 sequences; 11,453,150 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq438 383 7e-104 seq603 181 4e-43 seq161 181 4e-43 seq589 176 2e-41 seq658 172 2e-40 seq428 152 2e-34 seq368 150 7e-34 seq458 123 1e-25 seq89 123 1e-25 seq139 95.1 5e-17 >seq438 Length=1845 Score = 383 bits (424), Expect = 7e-104 Identities = 379/483 (78%), Gaps = 13/483 (3%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 1355 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 1414 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 1415 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 1474 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 1475 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 1534 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT--CGGCCGGTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| || | | | || || Sbjct 1535 TTGATCAGACATG--GTGTTTTGTGCCCTCTGCTCCTTGTGGGTAGGGGAATC-TCGCAT 1591 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 1592 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAA-TCCATAGGAATGTAGCTTGCCT 1650 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG--CTCC 375 ||| || |||||||| | | ||||| | ||| || ||||||||| | ||| | Sbjct 1651 CGGTAAGTATTATAGCCTGTG--GGAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 1708 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 1709 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 1768 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 1769 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 1828 Query 496 GGG 498 || Sbjct 1829 TGG 1831 >seq603 Length=103 Score = 181 bits (200), Expect = 4e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 520 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAG 579 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 103 GACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGCCCCGAAAG 44 Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 1 >seq161 Length=103 Score = 181 bits (200), Expect = 4e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 530 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACT 589 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 GATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGAGGGTGAACT 60 Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 103 >seq589 Length=103 Score = 176 bits (194), Expect = 2e-41 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCGGAATAGGG 60 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 61 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTG 102 >seq658 Length=103 Score = 172 bits (190), Expect = 2e-40 Identities = 100/103 (97%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 103 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGGGAAGCCAG 44 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 |||||||||||||||||||||| |||||||||| ||||||||| Sbjct 43 AGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAAT 1 >seq428 Length=103 Score = 152 bits (168), Expect = 2e-34 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 590 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGT 649 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| Sbjct 103 ATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGGTCTGACGT 44 Query 650 GCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| ||||||||||||||||||| Sbjct 43 GCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 10 >seq368 Length=103 Score = 150 bits (166), Expect = 7e-34 Identities = 86/88 (98%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTG 568 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 88 GGTGCACAATCGACCGATCCTGATGTCTTCGGATGGGTTTGAGTAAGAGCATAGCTGTTG 29 Query 569 GGACCCGAAAGATGGTGAACTATGCCTG 596 |||||||||||||||||||||||||||| Sbjct 28 GGACCCGAAAGATGGTGAACTATGCCTG 1 >seq458 Length=103 Score = 123 bits (136), Expect = 1e-25 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || || |||| |||| Sbjct 2 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGAGCACAATCG 61 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 62 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 103 >seq89 Length=103 Score = 123 bits (136), Expect = 1e-25 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || || |||| |||| Sbjct 2 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGGGCACAATCG 61 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 62 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 103 >seq139 Length=103 Score = 95.1 bits (104), Expect = 5e-17 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct 103 TGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGGATAGGGGC 44 Query 682 GA 683 || Sbjct 43 GA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079980501950