Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq160 143 4e-32 seq764 138 2e-30 seq761 138 2e-30 seq809 100 4e-19 seq808 100 4e-19 seq807 93.3 6e-17 seq523 89.7 8e-16 seq165 89.7 8e-16 seq840 73.4 6e-11 >seq160 Length=118 Score = 143 bits (158), Expect = 4e-32 Identities = 106/120 (88%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 1 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 58 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 59 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 118 >seq764 Length=103 Score = 138 bits (152), Expect = 2e-30 Identities = 93/103 (90%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||||| ||||||||||| |||||||| || | | ||||||||||||||| |||||||| Sbjct 3 GACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGGGCGGCCCA 60 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||| |||||||||||||||||||||||||||||||||||||| Sbjct 61 GAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 103 >seq761 Length=103 Score = 138 bits (152), Expect = 2e-30 Identities = 93/103 (90%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 ||||| ||||||||||| |||||||| || | | ||||||||||||||| |||||||| Sbjct 3 GACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGCGCGGCCCA 60 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||| |||||||||||||||||||||||||||||||||||||| Sbjct 61 GAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 103 >seq809 Length=103 Score = 100 bits (110), Expect = 4e-19 Identities = 86/104 (83%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGC 135 |||| ||||| |||||||||| ||||| | | ||||| ||||||||| | ||| ||||| Sbjct 2 AATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAAGCCCTCTCGGC 61 Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||| || | | ||||||||||||||||||| Sbjct 62 CAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 103 >seq808 Length=103 Score = 100 bits (110), Expect = 4e-19 Identities = 86/104 (83%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 77 AATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGC 135 |||| ||||| |||||||||| ||||| | | ||||| ||||||||| | ||| ||||| Sbjct 2 AATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTACCAAGGCCTCTCGGC 61 Query 136 CAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||| || | | ||||||||||||||||||| Sbjct 62 CAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 103 >seq807 Length=103 Score = 93.3 bits (102), Expect = 6e-17 Identities = 85/105 (81%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 70 GACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACC 128 || ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| || |||| Sbjct 103 GAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATTGCCAAGACC 44 Query 129 TGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCG 173 | ||||||||||| |||||||| || | | ||||||||||||| Sbjct 43 TCTCGGCCAAGGT--TAGACTCGCTGGCTCCGTCAGTGTAGCGCG 1 >seq523 Length=101 Score = 89.7 bits (98), Expect = 8e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 52 >seq165 Length=103 Score = 89.7 bits (98), Expect = 8e-16 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 103 GTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTCCC 50 >seq840 Length=103 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/52 (92%), Gaps = 1/52 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTA 52 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||| Sbjct 53 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTA 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751992554730