Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq697 136 2e-30 seq627 136 2e-30 seq240 136 2e-30 seq610 116 2e-24 seq872 100 2e-19 >seq697 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 |||||||||||||||||||||||||||||||||| | |||| | | ||| | ||||| Sbjct 1 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACTCCACCCGA 60 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCT 105 |||||||||||||||||||| |||||||||||||||||||||| Sbjct 61 TCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCT 103 >seq627 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 |||||||||||||||||||||||||||||||||| | |||| | | ||| | ||||| Sbjct 1 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACGCCACCCGA 60 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCT 105 |||||||||||||||||||| |||||||||||||||||||||| Sbjct 61 TCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCT 103 >seq240 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 |||||||||||||||||||||||||||||||||| | |||| | | ||| | ||||| Sbjct 1 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACCCCACCCGA 60 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCT 105 |||||||||||||||||||| |||||||||||||||||||||| Sbjct 61 TCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCT 103 >seq610 Length=103 Score = 116 bits (128), Expect = 2e-24 Identities = 81/92 (88%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | | || | | |||| | ||| Sbjct 92 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGGCATTAAAAAAACACCACCC 33 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGAC 92 |||||||||||||||||||||| ||||||||| Sbjct 32 GATCCCTAGTCGGCATAGTTTATGGTTAAGAC 1 >seq872 Length=148 Score = 100 bits (110), Expect = 2e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 4 CCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397332580