Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq359 154 3e-35 seq740 150 3e-34 seq487 150 3e-34 seq251 145 1e-32 seq373 141 2e-31 seq872 123 5e-26 seq225 89.7 9e-16 seq870 87.8 3e-15 >seq359 Length=103 Score = 154 bits (170), Expect = 3e-35 Identities = 96/103 (93%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 60 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||||||||| || |||||| Sbjct 61 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGG 103 >seq740 Length=103 Score = 150 bits (166), Expect = 3e-34 Identities = 95/103 (92%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGGGAAATTCT 60 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||||||||| || |||||| Sbjct 61 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGG 103 >seq487 Length=103 Score = 150 bits (166), Expect = 3e-34 Identities = 95/103 (92%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGCGAAATTCT 60 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||||||||| || |||||| Sbjct 61 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGG 103 >seq251 Length=103 Score = 145 bits (160), Expect = 1e-32 Identities = 94/103 (91%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 103 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGA 44 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 || |||||||||||||||||| |||||||| ||||||||| Sbjct 43 CCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 1 >seq373 Length=103 Score = 141 bits (156), Expect = 2e-31 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGCTTCTAGGA 60 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 || |||||||||||||||||| |||||||| ||||||||| Sbjct 61 CCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 103 >seq872 Length=148 Score = 123 bits (136), Expect = 5e-26 Identities = 79/85 (93%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 234 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| Sbjct 148 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCA 89 Query 294 TTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| |||||||||||||||| Sbjct 88 TTAATCA-AGAACGAAAGTTAGGGG 65 >seq225 Length=103 Score = 89.7 bits (98), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 5/107 (5%) Strand=Plus/Minus Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||||||||||||| | || | |||| ||| | | || || ||||| |||| Sbjct 103 GGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGGCTTT 48 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATA 121 ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 47 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1 >seq870 Length=103 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/94 (82%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | ||||| ||||||||| Sbjct 95 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGGGAACCAGGACTT 40 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 108 |||||||||||||||||||||||||||||||||| Sbjct 39 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915190646656