Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq251 122 9e-26 seq373 116 4e-24 seq359 95.1 1e-17 seq740 91.5 2e-16 seq487 91.5 2e-16 seq225 87.8 2e-15 seq870 80.6 3e-13 >seq251 Length=103 Score = 122 bits (134), Expect = 9e-26 Identities = 90/104 (87%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 57 AATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116 |||| |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 103 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGA 44 Query 117 CCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTC 160 || ||||||||| |||| ||| |||||||| ||||||||| Sbjct 43 CC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 1 >seq373 Length=103 Score = 116 bits (128), Expect = 4e-24 Identities = 89/104 (86%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 57 AATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116 |||| |||| ||||||||||||||||||||||| ||||||||||||| || |||||||| Sbjct 1 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGCTTCTAGGA 60 Query 117 CCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTC 160 || ||||||||| |||| ||| |||||||| ||||||||| Sbjct 61 CC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 103 >seq359 Length=103 Score = 95.1 bits (104), Expect = 1e-17 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 60 Query 182 TGGATTTATT 191 |||||||||| Sbjct 61 TGGATTTATT 70 >seq740 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| ||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGGGAAATTCT 60 Query 182 TGGATTTATT 191 |||||||||| Sbjct 61 TGGATTTATT 70 >seq487 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| ||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGCGAAATTCT 60 Query 182 TGGATTTATT 191 |||||||||| Sbjct 61 TGGATTTATT 70 >seq225 Length=103 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 60 GAACCAGGGCTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1 >seq870 Length=103 Score = 80.6 bits (88), Expect = 3e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC 47 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 52 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994930880