Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099305.1_202017-02- 08] 1,022 sequences; 11,528,256 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq188 152 8e-35 seq377 147 4e-33 seq246 136 6e-30 seq159 120 5e-25 seq278 91.5 2e-16 >seq188 Length=103 Score = 152 bits (168), Expect = 8e-35 Identities = 92/97 (95%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||||||||||||||||||| |||||| |||||||||||| ||||| |||||||| Sbjct 97 ATAATTGGTTTTTGCGGCTGTCTGATCAGGCATTGCCGCGAAGCTCCCATCCGCTGGATT 38 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 |||||||||||||||||||||||||||||||| |||| Sbjct 37 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAA 1 >seq377 Length=103 Score = 147 bits (162), Expect = 4e-33 Identities = 87/91 (96%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||||||| Sbjct 13 ATAATTGGTTTTTGCGGCTGTCTGATCAGGCATTGCCGCAAAGCTACCATCCGCTGGATT 72 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATG 117 ||||||||||||||||||||||||||||||| Sbjct 73 ATGGCTGAACGCCTCTAAGTCAGAATCCATG 103 >seq246 Length=103 Score = 136 bits (150), Expect = 6e-30 Identities = 92/102 (90%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 ||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1 TGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAAAGCCTCTAA 60 Query 105 GTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCTGCACA 145 |||||||||||||| |||||| ||||| |||| | || |||| Sbjct 61 GTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACA 102 >seq159 Length=103 Score = 120 bits (132), Expect = 5e-25 Identities = 87/98 (89%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||| |||| |||||| | Sbjct 96 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGGCTGATCAGGCATT 39 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGC 98 ||||||||||||||||| |||||||||||||||||||| Sbjct 38 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGC 1 >seq278 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 75/89 (84%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCT 137 |||||||||||||||||||||||||||||||||||||||| |||||| || || |||| | Sbjct 2 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGCGATTTCTTT 61 Query 138 CCT--GCACATCGTAGTCGGATACGAATA 164 || |||| ||| ||||||||||| Sbjct 62 GCTCCACACAATATAGATGGATACGAATA 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819191889408