Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099345.1_202017-02- 08] 1,124 sequences; 11,543,514 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq720 383 7e-104 seq49 293 1e-76 seq298 127 9e-27 seq617 123 1e-25 seq302 123 1e-25 >seq720 Length=594 Score = 383 bits (424), Expect = 7e-104 Identities = 379/483 (78%), Gaps = 13/483 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 491 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 432 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 431 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 372 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 371 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 312 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT--CGGCCGGTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| || | | | || || Sbjct 311 TTGATCAGACATG--GTGTTTTGTGCCCTCTGCTCCTTGTGGGTAGGGGAATC-TCGCAT 255 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 254 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAA-TCCATAGGAATGTAGCTTGCCT 196 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG--CTCC 375 ||| || |||||||| | | ||||| | ||| || ||||||||| | ||| | Sbjct 195 CGGTAAGTATTATAGCCTGTG--GGAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 138 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 137 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 78 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGT 495 |||| ||||||||||||||||||||| |||||| | ||||||||||||||||||| |||| Sbjct 77 TAACGTCTATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGT 18 Query 496 GGG 498 || Sbjct 17 TGG 15 >seq49 Length=570 Score = 293 bits (324), Expect = 1e-76 Identities = 168/172 (98%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 570 GCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 511 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 451 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 450 TCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 399 >seq298 Length=103 Score = 127 bits (140), Expect = 9e-27 Identities = 91/102 (89%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || ||||||| |||| Sbjct 102 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGTGCACAATCG 43 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 42 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 1 >seq617 Length=103 Score = 123 bits (136), Expect = 1e-25 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || || |||| |||| Sbjct 2 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGGGCACAATCG 61 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 62 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 103 >seq302 Length=103 Score = 123 bits (136), Expect = 1e-25 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || || |||| |||| Sbjct 2 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGCGCACAATCG 61 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 62 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079975890200