Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099345.1_202017-02- 08] 1,124 sequences; 11,543,514 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq145 226 5e-57 seq639 159 6e-37 seq422 132 8e-29 seq306 113 7e-23 >seq145 Length=221 Score = 226 bits (250), Expect = 5e-57 Identities = 172/200 (86%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---A 118 |||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | Sbjct 1 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 60 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 61 ACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 117 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 118 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 177 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 178 GAAAGAGCTCTCAATCTGTC 197 >seq639 Length=103 Score = 159 bits (176), Expect = 6e-37 Identities = 97/103 (94%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 10 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 69 |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 103 GCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGCCCTGTTAT 44 Query 70 TGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAG 112 |||||||||||||||| |||| ||| || |||||||||||||| Sbjct 43 TGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAG 1 >seq422 Length=103 Score = 132 bits (146), Expect = 8e-29 Identities = 78/81 (96%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 23 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGGGCGGCCCAGAACGTCTAAGGGCATCACAGA 82 Query 62 CCTGTTATTGCCTCAAACTTC 82 ||||||||||||||||||||| Sbjct 83 CCTGTTATTGCCTCAAACTTC 103 >seq306 Length=103 Score = 113 bits (124), Expect = 7e-23 Identities = 67/70 (96%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 70 ACTCGCTGGCTCCGTCAGGGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 11 Query 62 CCTGTTATTG 71 |||||||||| Sbjct 10 CCTGTTATTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796791323844