Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099345.1_202017-02- 08] 1,124 sequences; 11,543,514 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq113 419 7e-115 seq316 178 4e-42 seq787 172 2e-40 seq614 172 2e-40 seq915 168 2e-39 seq368 149 2e-33 seq849 87.8 5e-15 seq931 78.8 3e-12 >seq113 Length=303 Score = 419 bits (464), Expect = 7e-115 Identities = 279/304 (92%), Gaps = 6/304 (2%) Strand=Plus/Minus Query 205 TGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTT 264 |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct 303 TGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCCATGCGATTCGAAAAGTT 244 Query 265 ATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCT 324 ||||||||||| ||| ||| || |||| | ||| |||||||||||||||||||| | || Sbjct 243 ATTATGAATCATCAAAGAGTCC-GAAGA-CATTGATTTTTTATCTAATAAATACATCTCT 186 Query 325 TCCGAAG--TCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGT 381 ||| ||| ||| | |||| ||||||||||||||||||||||||||| ||||| |||||| Sbjct 185 TCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAATTACCACAGTTATACCATGT 126 Query 382 AGTAA-GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 440 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 AGTAAAGGAACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT 66 Query 441 ATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 500 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 65 ATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTG 6 Query 501 GCAG 504 |||| Sbjct 5 GCAG 2 >seq316 Length=103 Score = 178 bits (196), Expect = 4e-42 Identities = 101/103 (98%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 78 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 60 Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 61 GGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 103 >seq787 Length=103 Score = 172 bits (190), Expect = 2e-40 Identities = 100/103 (97%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 78 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 137 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 103 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCCCCCTCTCC 44 Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 43 GGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1 >seq614 Length=103 Score = 172 bits (190), Expect = 2e-40 Identities = 100/103 (97%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 60 Query 213 CAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255 |||||||||||||||||||||||| || ||||||||||||||| Sbjct 61 CAGAAATTTGAATGAACCATCGCCAGCACAAGGCCATGCGATT 103 >seq915 Length=103 Score = 168 bits (186), Expect = 2e-39 Identities = 99/103 (96%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 153 TTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGG 212 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 103 TTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGGTGATAGGG 44 Query 213 CAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255 |||||||||||||||||||||||| || ||||||||||||||| Sbjct 43 CAGAAATTTGAATGAACCATCGCCAGCACAAGGCCATGCGATT 1 >seq368 Length=107 Score = 149 bits (164), Expect = 2e-33 Identities = 97/107 (91%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 22 CCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAA 81 ||| || | |||||||||| ||||||||||||||||||||| | | ||||||||||| Sbjct 1 CCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCTCCCTGAATTAGGATTGGGTAA 60 Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC 128 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC 107 >seq849 Length=103 Score = 87.8 bits (96), Expect = 5e-15 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| ||| || | |||||||||| |||||||||||||||||| Sbjct 32 GTACTCATTCCAATTACAAGGCCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 91 Query 61 CCC 63 ||| Sbjct 92 CCC 94 >seq931 Length=103 Score = 78.8 bits (86), Expect = 3e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510383023104