Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099355.1_202017-02- 08] 1,556 sequences; 11,567,798 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq377 104 1e-20 seq1460 95.1 7e-18 seq1377 86.0 4e-15 seq472 80.6 2e-13 seq1152 75.2 7e-12 >seq377 Length=103 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || |||||||||||||||||||||||||||||||| Sbjct 15 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGACG 72 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 73 TAAT-CAACGCAAGCT 87 >seq1460 Length=103 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||| ||| |||||||||||||||||||| Sbjct 85 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGTCGGTGTGTACAAAGGGCAGGGACG 28 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 27 TAAT-CAACGCAAGCT 13 >seq1377 Length=103 Score = 86.0 bits (94), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 54 TAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATA 113 ||||||||| || |||||| || ||||||||||| |||||||||||||||||| ||||| Sbjct 1 TAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAAGTAAT- 57 Query 114 CAACGCAAGCT 124 ||||||||||| Sbjct 58 CAACGCAAGCT 68 >seq472 Length=103 Score = 80.6 bits (88), Expect = 2e-13 Identities = 57/63 (90%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||||| |||| || |||||| || ||||||||||| |||||||||||||||||||| Sbjct 43 CTCACTAAGACATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 100 Query 109 TAA 111 ||| Sbjct 101 TAA 103 >seq1152 Length=103 Score = 75.2 bits (82), Expect = 7e-12 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand=Plus/Plus Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||| || ||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct 2 TCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGAAAGCT 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300795612080