Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq176 141 5e-32 seq1063 136 2e-30 seq1032 136 2e-30 seq721 136 2e-30 seq332 114 7e-24 seq463 102 5e-20 seq155 102 5e-20 seq805 98.7 6e-19 >seq176 Length=103 Score = 141 bits (156), Expect = 5e-32 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCC 65 ||||||||||||||||||||||||||||||| | |||| | | |||| | |||||||| Sbjct 103 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACACCCCCCGATCC 44 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 43 CTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGAT 1 >seq1063 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 |||||||||||||||||||||||||||||||||| | |||| | | ||| | ||||| Sbjct 1 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACGCCACCCGA 60 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCT 105 |||||||||||||||||||| |||||||||||||||||||||| Sbjct 61 TCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCT 103 >seq1032 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | | || | ||| Sbjct 103 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAACCACCACCC 44 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTAT 103 |||||||||||||||||||||| |||||||||||||||||||| Sbjct 43 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTAT 1 >seq721 Length=103 Score = 136 bits (150), Expect = 2e-30 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGA 62 |||||||||||||||||||||||||||||||||| | |||| | | ||| | ||||| Sbjct 1 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACCCCACCCGA 60 Query 63 TCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCT 105 |||||||||||||||||||| |||||||||||||||||||||| Sbjct 61 TCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCT 103 >seq332 Length=103 Score = 114 bits (126), Expect = 7e-24 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | |||| | ||| Sbjct 88 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGGGGGTCATTAAAAAAACACCACCC 29 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTA 88 |||||||||||||||||||||| ||||| Sbjct 28 GATCCCTAGTCGGCATAGTTTATGGTTA 1 >seq463 Length=103 Score = 102 bits (112), Expect = 5e-20 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||| |||||| | |||| | | |||| | ||| Sbjct 23 GAACCCAAAGACTTTGATTTCTCGTAAGGCGCCGAGTGGGTCATTAAAAAAACACCACCC 82 Query 61 GATCCCTAGTCGGCATAGTTT 81 ||||||||||||||||||||| Sbjct 83 GATCCCTAGTCGGCATAGTTT 103 >seq155 Length=103 Score = 102 bits (112), Expect = 5e-20 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||| |||||| | |||| | | |||| | ||| Sbjct 23 GAACCCAAAGACTTTGATTTCTCGTAAGGGGCCGAGTGGGTCATTAAAAAAACACCACCC 82 Query 61 GATCCCTAGTCGGCATAGTTT 81 ||||||||||||||||||||| Sbjct 83 GATCCCTAGTCGGCATAGTTT 103 >seq805 Length=103 Score = 98.7 bits (108), Expect = 6e-19 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 2 AACACCACCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGGATCTGATCA 61 Query 111 TCTTCGA 117 ||||||| Sbjct 62 TCTTCGA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397181200