Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq727 320 3e-85 seq874 127 4e-27 seq615 127 4e-27 seq260 127 4e-27 seq666 89.7 9e-16 seq399 87.8 3e-15 seq692 86.0 1e-14 seq360 84.2 4e-14 >seq727 Length=240 Score = 320 bits (354), Expect = 3e-85 Identities = 207/224 (92%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 96 GTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 240 GTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAGGACGTTTGG 181 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||| Sbjct 180 TTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCA 121 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCA 61 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||||| |||||||||||||| |||||||||||||||| Sbjct 60 TTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTAGGGG 18 >seq874 Length=103 Score = 127 bits (140), Expect = 4e-27 Identities = 81/87 (93%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 17 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCGTATTGCTCGA 76 Query 119 ATACATTAGCATGGAATAATAGAATAG 145 ||| ||||||||||||||||||||||| Sbjct 77 ATATATTAGCATGGAATAATAGAATAG 103 >seq615 Length=103 Score = 127 bits (140), Expect = 4e-27 Identities = 81/87 (93%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 17 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGAGTTCAAAGCAGGCGTATTGCTCGA 76 Query 119 ATACATTAGCATGGAATAATAGAATAG 145 ||| ||||||||||||||||||||||| Sbjct 77 ATATATTAGCATGGAATAATAGAATAG 103 >seq260 Length=103 Score = 127 bits (140), Expect = 4e-27 Identities = 81/87 (93%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 17 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGGGTTCAAAGCAGGCGTATTGCTCGA 76 Query 119 ATACATTAGCATGGAATAATAGAATAG 145 ||| ||||||||||||||||||||||| Sbjct 77 ATATATTAGCATGGAATAATAGAATAG 103 >seq666 Length=103 Score = 89.7 bits (98), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 5/107 (5%) Strand=Plus/Minus Query 16 GGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTT 75 ||||||||||||||| | || | |||| ||| | | || || ||||| |||| Sbjct 103 GGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGGCTTT 48 Query 76 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATA 121 ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 47 TACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1 >seq399 Length=103 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/94 (82%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | ||||| ||||||||| Sbjct 95 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGGGAACCAGGACTT 40 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 108 |||||||||||||||||||||||||||||||||| Sbjct 39 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 6 >seq692 Length=103 Score = 86.0 bits (94), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || || |||||| Sbjct 101 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCCGGACTT 46 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 |||||||||||||||||||||||||||||||||| | |||||||| Sbjct 45 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGA 1 >seq360 Length=103 Score = 84.2 bits (92), Expect = 4e-14 Identities = 76/94 (81%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74 |||||||||||||||| | || | |||| ||| | | || || ||||||||| Sbjct 13 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTC--CTGGCGAACCAGGACTT 68 Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 108 |||||||||||||||||||||||||||||||||| Sbjct 69 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915190115840