Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq952 104 1e-20 seq330 95.1 7e-18 seq282 95.1 7e-18 seq575 87.8 1e-15 seq816 82.4 5e-14 seq273 78.8 6e-13 >seq952 Length=103 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || |||||||||||||||||||||||||||||||| Sbjct 15 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGGGTGTACAAAGGGCAGGGACG 72 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 73 TAAT-CAACGCAAGCT 87 >seq330 Length=103 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||||||| ||| |||||||||||||||| Sbjct 11 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGGACAAAGGGCAGGGACG 68 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 69 TAAT-CAACGCAAGCT 83 >seq282 Length=103 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || |||||| || ||||||||||| | |||||||||||||||||| Sbjct 13 CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGGGTACAAAGGGCAGGGACG 70 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 71 TAAT-CAACGCAAGCT 85 >seq575 Length=103 Score = 87.8 bits (96), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 3/72 (4%) Strand=Plus/Plus Query 53 CTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAAT 112 |||||||||| || |||||| || ||||||||||| ||||||||||||||||| |||||| Sbjct 1 CTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGCCGTAAT 58 Query 113 ACAACGCAAGCT 124 ||||||||||| Sbjct 59 -CAACGCAAGCT 69 >seq816 Length=103 Score = 82.4 bits (90), Expect = 5e-14 Identities = 62/69 (90%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115 ||||||| || |||||| || ||||||||||| |||||||||||||||||||| ||| || Sbjct 103 AGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGGAAT-CA 47 Query 116 ACGCAAGCT 124 ||||||||| Sbjct 46 ACGCAAGCT 38 >seq273 Length=103 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| |||||| || ||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 1 TCAATCGGTACTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CACCGCAAG 58 Query 123 CT 124 || Sbjct 59 CT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300796954400