Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq874 113 5e-23 seq615 113 5e-23 seq260 113 5e-23 seq727 98.7 1e-18 seq399 77.0 4e-12 seq360 75.2 1e-11 seq666 73.4 5e-11 >seq874 Length=103 Score = 113 bits (124), Expect = 5e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 36 CTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATT 94 ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||| Sbjct 103 CTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACGCTCTAATT 44 Query 95 TTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||||||||||| Sbjct 43 TTTTCAAAGTAAAAGTCCTGGTTC 20 >seq615 Length=103 Score = 113 bits (124), Expect = 5e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 36 CTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATT 94 ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||| Sbjct 103 CTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACTCTCTAATT 44 Query 95 TTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||||||||||| Sbjct 43 TTTTCAAAGTAAAAGTCCTGGTTC 20 >seq260 Length=103 Score = 113 bits (124), Expect = 5e-23 Identities = 76/84 (90%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 36 CTATTCTATTATTCCATGCTAATGTATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATT 94 ||||||||||||||||||||||| |||||| || || ||||||||||||| |||||||| Sbjct 103 CTATTCTATTATTCCATGCTAATATATTCGAGCAATACGCCTGCTTTGAACCCTCTAATT 44 Query 95 TTCTCAAGGTAAAAGTCCTGGTTC 118 || |||| |||||||||||||||| Sbjct 43 TTTTCAAAGTAAAAGTCCTGGTTC 20 >seq727 Length=240 Score = 98.7 bits (108), Expect = 1e-18 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 160 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 219 Query 66 GGC-GTAAGCCTGCTTTGAAC 85 || || ||||||||||||| Sbjct 220 AGCAATACGCCTGCTTTGAAC 240 >seq399 Length=103 Score = 77.0 bits (84), Expect = 4e-12 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 || |||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 3 TACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCC 52 >seq360 Length=103 Score = 75.2 bits (82), Expect = 1e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 102 GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 57 >seq666 Length=103 Score = 73.4 bits (80), Expect = 5e-11 Identities = 53/60 (88%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 60 TATTCGGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 |||||| || || |||||||||||||||||||||||| |||| ||||||| |||||||| Sbjct 1 TATTCGAGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGCCCTGGTTC 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595193772720