Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099425.1_202017-02- 08] 1,080 sequences; 11,540,941 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq727 201 1e-49 seq874 131 2e-28 seq615 125 7e-27 seq260 125 7e-27 seq666 87.8 2e-15 seq692 82.4 8e-14 seq399 80.6 3e-13 seq360 78.8 1e-12 >seq727 Length=240 Score = 201 bits (222), Expect = 1e-49 Identities = 141/158 (89%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 35 GTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATGGAATAATAGAATAGGACGTGCGG 93 ||||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| || Sbjct 240 GTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATAGGACGTTTGG 181 Query 94 TTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTC 153 ||||||||||| ||||||||||||| ||||||||| |||| ||| |||||||| || Sbjct 180 TTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATC 122 Query 154 AGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 ||||||||||||||| |||||||||||||||||||||| Sbjct 121 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 84 >seq874 Length=103 Score = 131 bits (144), Expect = 2e-28 Identities = 80/84 (95%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 20 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCGTATTGCTCGAATA 79 Query 61 CATTACCATGGAATAATAGAATAG 84 |||| |||||||||||||||||| Sbjct 80 TATTAGCATGGAATAATAGAATAG 103 >seq615 Length=103 Score = 125 bits (138), Expect = 7e-27 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 20 GAACCAGGACTTTTACTTTGAAAAAATTAGAGAGTTCAAAGCAGGCGTATTGCTCGAATA 79 Query 61 CATTACCATGGAATAATAGAATAG 84 |||| |||||||||||||||||| Sbjct 80 TATTAGCATGGAATAATAGAATAG 103 >seq260 Length=103 Score = 125 bits (138), Expect = 7e-27 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 20 GAACCAGGACTTTTACTTTGAAAAAATTAGAGGGTTCAAAGCAGGCGTATTGCTCGAATA 79 Query 61 CATTACCATGGAATAATAGAATAG 84 |||| |||||||||||||||||| Sbjct 80 TATTAGCATGGAATAATAGAATAG 103 >seq666 Length=103 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 60 GAACCAGGGCTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1 >seq692 Length=103 Score = 82.4 bits (90), Expect = 8e-14 Identities = 53/57 (93%), Gaps = 1/57 (2%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGA 57 ||||| |||||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct 57 GAACCCGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGA 1 >seq399 Length=103 Score = 80.6 bits (88), Expect = 3e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC 47 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 52 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 6 >seq360 Length=103 Score = 78.8 bits (86), Expect = 1e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC 47 |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 57 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994643200