Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq353 163 5e-38 seq461 154 3e-35 seq656 150 3e-34 seq760 145 1e-32 seq897 141 2e-31 seq202 123 5e-26 >seq353 Length=147 Score = 163 bits (180), Expect = 5e-38 Identities = 103/110 (94%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGA 118 || || ||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 110 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGA 51 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG 168 ||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 50 ATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGG 1 >seq461 Length=103 Score = 154 bits (170), Expect = 3e-35 Identities = 96/103 (93%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 60 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||||||||| || |||||| Sbjct 61 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGG 103 >seq656 Length=103 Score = 150 bits (166), Expect = 3e-34 Identities = 95/103 (92%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGGGAAATTCT 60 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGG 284 |||||||||||||||||||||||||||||||| || |||||| Sbjct 61 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGG 103 >seq760 Length=103 Score = 145 bits (160), Expect = 1e-32 Identities = 94/103 (91%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 1 CATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACAATCGTAAT 60 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGA 230 |||||||||||| |||||||| ||||||||||||||||||| Sbjct 61 GATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGA 103 >seq897 Length=103 Score = 141 bits (156), Expect = 2e-31 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA 177 |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGGTTCTAGGA 60 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 || |||||||||||||||||| |||||||| ||||||||| Sbjct 61 CCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 103 >seq202 Length=145 Score = 123 bits (136), Expect = 5e-26 Identities = 79/85 (93%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 234 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCA 293 |||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| Sbjct 1 GAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCA 60 Query 294 TTAATCAGTGAACGAAAGTTAGGGG 318 ||||||| |||||||||||||||| Sbjct 61 TTAATCA-AGAACGAAAGTTAGGGG 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915189777216