Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq728 187 1e-44 seq813 172 2e-40 seq384 168 3e-39 seq265 143 1e-31 seq811 141 4e-31 seq731 141 4e-31 seq315 136 2e-29 seq920 131 7e-28 seq730 129 2e-27 seq671 123 1e-25 seq701 120 1e-24 seq400 114 5e-23 seq489 111 7e-22 seq576 98.7 4e-18 seq491 98.7 4e-18 seq483 98.7 4e-18 seq1093 78.8 4e-12 seq781 78.8 4e-12 seq532 75.2 5e-11 >seq728 Length=106 Score = 187 bits (206), Expect = 1e-44 Identities = 105/106 (99%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 512 GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 571 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 GCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGA 47 Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 1 >seq813 Length=103 Score = 172 bits (190), Expect = 2e-40 Identities = 100/103 (97%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 44 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 |||||||| |||||||||| ||||||||||||||||| ||||| Sbjct 43 GAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTT 1 >seq384 Length=103 Score = 168 bits (186), Expect = 3e-39 Identities = 99/103 (96%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAATCTCTGGTG 60 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 |||||||| |||||||||| ||||||||||||||||| ||||| Sbjct 61 GAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTT 103 >seq265 Length=103 Score = 143 bits (158), Expect = 1e-31 Identities = 93/102 (91%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||| Sbjct 1 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCTATCTAAAG 60 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135 |||||||||||| |||||||||||||| ||||||| |||||| Sbjct 61 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGAT 102 >seq811 Length=103 Score = 141 bits (156), Expect = 4e-31 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 53 TGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGAC 112 ||||||||||||||||| |||| |||||||| | ||||||||||||||||| | |||||| Sbjct 103 TGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAGCTAAATATTGTCGAGAGAC 44 Query 113 CGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 |||||||| ||||||| |||||| ||||||||||||| ||||| Sbjct 43 CGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTT 1 >seq731 Length=103 Score = 141 bits (156), Expect = 4e-31 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||| |||||||| || || |||||||||| |||||||||||||||| ||||| || Sbjct 1 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGGCTAACGTC 60 Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGT 485 ||||||||||||||||||| |||||| | |||||||||||||| Sbjct 61 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGT 103 >seq315 Length=103 Score = 136 bits (150), Expect = 2e-29 Identities = 92/103 (89%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135 |||||||| | ||||||||||||||||||| |||||||||||||| ||||| | |||||| Sbjct 103 GGTAAATTCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGGACAGTGAT 44 Query 136 CGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 ||||||||||||| |||||| ||||||||| |||||| |||| Sbjct 43 GGAAAGATGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGT 1 >seq920 Length=103 Score = 131 bits (144), Expect = 7e-28 Identities = 84/92 (91%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466 |||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||| Sbjct 2 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGTGTGTAAAAC 61 Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 || | ||||||||||||||||||| |||| || Sbjct 62 CCATACGCGTAATGAAAGTGAACGTAGGTTGG 93 >seq730 Length=103 Score = 129 bits (142), Expect = 2e-27 Identities = 83/91 (91%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct 103 CCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGAGTGTTTGGGGGTAAAACC 44 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | | ||||||||||||||||||| |||| || Sbjct 43 CATACGCGTAATGAAAGTGAACGTAGGTTGG 13 >seq671 Length=103 Score = 123 bits (136), Expect = 1e-25 Identities = 90/102 (88%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG-GGTGCACCATCG 520 |||||| | ||||||||||||||||||| |||| || || || || || |||| |||| Sbjct 2 AAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAGAGGGGCACAATCG 61 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 |||||||||||||||||||||||||||||||||||||||||| Sbjct 62 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 103 >seq701 Length=103 Score = 120 bits (132), Expect = 1e-24 Identities = 90/103 (87%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 451 TGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG- 508 ||||||||||| |||||| | ||||||||||||||||||| |||| || | || || Sbjct 1 TGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCTTCGCAAGA 60 Query 509 GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 551 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 61 GGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAG 103 >seq400 Length=103 Score = 114 bits (126), Expect = 5e-23 Identities = 77/86 (90%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 115 ATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGC 174 |||||| ||||||| |||||| ||||||||||||| |||||| |||||||| |||||| Sbjct 1 ATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACTTTGAAAAGAGAGCGAAAAAGT 60 Query 175 ACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||||||||||||||||||| || Sbjct 61 ACGTGAAATTGTTGAAAGGGAAGGGC 86 >seq489 Length=103 Score = 111 bits (122), Expect = 7e-22 Identities = 72/79 (91%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||||||||||| |||||||| || || ||||||||| |||||||||||||||||||||| Sbjct 79 AGGATGCTGGCATAATGGTTATATGCCTCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 20 Query 440 ATCTATGCGAGTGTTTGGG 458 |||||||||||||||||| Sbjct 19 GTCTATGCGAGTGTTTGGG 1 >seq576 Length=103 Score = 98.7 bits (108), Expect = 4e-18 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 27 TGTAAAGTGCCTTCGAAGAGTCGAGATGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 86 Query 83 TTCTTCTAAAGCTAAAT 99 | | ||||||||||||| Sbjct 87 TCCATCTAAAGCTAAAT 103 >seq491 Length=103 Score = 98.7 bits (108), Expect = 4e-18 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 349 GCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCG 406 ||| || ||||||||| | ||| | | | ||||||||||| |||||| | || || Sbjct 103 GCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGGATGCTGGCATAATGGGTATATGCC 44 Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGA 449 |||||||||| |||||||||||||||||||||| ||||||||| Sbjct 43 GCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTATGCGA 1 >seq483 Length=103 Score = 98.7 bits (108), Expect = 4e-18 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||| ||||||||||||||||||||| |||| ||||||| Sbjct 27 TGTAAAGTGCCTTCGAAGAGTCGAGGTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 86 Query 83 TTCTTCTAAAGCTAAAT 99 | | ||||||||||||| Sbjct 87 TCCATCTAAAGCTAAAT 103 >seq1093 Length=103 Score = 78.8 bits (86), Expect = 4e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| || |||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 63 TGTAAAGTGCCCTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 4 Query 83 T 83 | Sbjct 3 T 3 >seq781 Length=103 Score = 78.8 bits (86), Expect = 4e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATT 83 |||||| |||||||||||||||||||||||||||||| |||| |||||||| Sbjct 51 CTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATT 1 >seq532 Length=103 Score = 75.2 bits (82), Expect = 5e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 103 AAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGTGC 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079976040350