Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq353 154 2e-35 seq760 122 9e-26 seq897 116 4e-24 seq461 95.1 1e-17 seq656 91.5 2e-16 >seq353 Length=147 Score = 154 bits (170), Expect = 2e-35 Identities = 99/107 (93%), Gaps = 1/107 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60 |||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| Sbjct 107 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 48 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGG 107 |||| ||||||||||||||||||||||| ||||||||||||| || Sbjct 47 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGG 1 >seq760 Length=103 Score = 122 bits (134), Expect = 9e-26 Identities = 89/102 (87%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||||| Sbjct 1 CATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGA-CAATCGTAA 59 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCA 168 |||| |||| ||| |||||||| ||||||||||||||||| Sbjct 60 TGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCA 101 >seq897 Length=103 Score = 116 bits (128), Expect = 4e-24 Identities = 89/104 (86%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 57 AATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116 |||| |||| ||||||||||||||||||||||| ||||||||||||| || |||||||| Sbjct 1 AATATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGGTTCTAGGA 60 Query 117 CCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTC 160 || ||||||||| |||| ||| |||||||| ||||||||| Sbjct 61 CC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTC 103 >seq461 Length=103 Score = 95.1 bits (104), Expect = 1e-17 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 60 Query 182 TGGATTTATT 191 |||||||||| Sbjct 61 TGGATTTATT 70 >seq656 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| ||| |||||||| Sbjct 1 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGGGAAATTCT 60 Query 182 TGGATTTATT 191 |||||||||| Sbjct 61 TGGATTTATT 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511994459680