Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900099445.1_202017-02- 08] 1,117 sequences; 11,510,863 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1061 145 1e-32 seq314 118 2e-24 seq650 113 7e-23 >seq1061 Length=147 Score = 145 bits (160), Expect = 1e-32 Identities = 108/124 (87%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 44 CTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTA 103 |||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 147 CTGTCTGATCAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTA 88 Query 104 AGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACG 160 ||||||||||||||| |||||| ||||| |||| | || |||| ||| ||||||| Sbjct 87 AGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACG 28 Query 161 AATA 164 |||| Sbjct 27 AATA 24 >seq314 Length=103 Score = 118 bits (130), Expect = 2e-24 Identities = 84/94 (89%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 92 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 35 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGA 94 ||||||||||||||||| |||||||||||||||| Sbjct 34 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGA 1 >seq650 Length=103 Score = 113 bits (124), Expect = 7e-23 Identities = 83/94 (88%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||| |||||||| |||||| | Sbjct 92 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGTCTGTCTGATCAGGCATT 35 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGA 94 ||||||||||||||||| |||||||||||||||| Sbjct 34 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819191135488