Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq5874 116 5e-24 >seq5874 Length=2543 Score = 116 bits (128), Expect = 5e-24 Identities = 177/249 (71%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 ||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 1192 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 1250 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC--CACCA-----GCTC 119 ||||||||| ||||||||||| || | || ||| ||| | |||| || | Sbjct 1251 GTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCCTTCACCCTTCTGGCGC 1310 Query 120 AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 || | || | | || ||| |||| |||||||||||||| ||| |||||||| Sbjct 1311 AAGCCA--GTCAAGCTACAAGGGCGTACCTTATCCCGAAGTTACGGTACCAATTTGCCGA 1368 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | ||||||||||||| Sbjct 1369 GTTCCTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCCCACCTGTGTCGG 1428 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 1429 TTTGCGGTA 1437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694322666408