Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq5874 251 3e-64 seq4640 122 3e-25 >seq5874 Length=2543 Score = 251 bits (278), Expect = 3e-64 Identities = 267/349 (77%), Gaps = 15/349 (4%) Strand=Plus/Plus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 |||||||| |||||| ||||||||||||| | | ||||| || |||||||||||||| Sbjct 2210 ACCTAAATAGTTTTCGGAGAGAACCAGCTATTTCCAGGTTTGTTTAGCCTTTCACCCCTA 2269 Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTAC 261 ||||||| ||||||||| | |||||||| | ||||||||||| |||||| || |||| Sbjct 2270 TCCACAGCTCATCCCCTAACTTTTCAACGTTAGTGGGTTCGGACCTCCAGTACGTGTTAC 2329 Query 262 CCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCA 321 | ||||| |||| ||||||||||||||| | | ||||||||| | || ||| | Sbjct 2330 CGCACCTTCATCCTGGCCATGGATAGATCACCTGGTTTCGGGTCTACGCCCAGCAACTGA 2389 Query 322 TACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACAC 381 ||||||||||||||||||||||||||||| || ||| | || |||||| || || || Sbjct 2390 -ACGCCCTATTCGGACTCGCTTTCGCTACGCCTGCCCTATAC-GGTTAAGCTTGCTACTG 2447 Query 382 AACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCA 441 |||| || |||| | | |||| | ||||||| ||||||||||| | || || Sbjct 2448 AACG-TAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACC----CCTTACGAG--- 2499 Query 442 CTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACT 490 |||||||| | ||||| ||| ||||||||| |||||||||| Sbjct 2500 -----GCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACT 2543 >seq4640 Length=998 Score = 122 bits (134), Expect = 3e-25 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 458 TTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTC 517 ||||| ||| ||||||||| |||||||||||||| || ||||| |||||| |||||| Sbjct 5 TTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTTC 64 Query 518 CCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCC 577 |||||||||||| || | ||||||||| | |||||||||| ||| || ||||||| Sbjct 65 CCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCCC 124 Query 578 GCCAGATTCACACGAAATTTCA 599 ||| |||| || |||||| Sbjct 125 CCCATCTTCAGACAGGATTTCA 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817391048704