Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq5874 269 7e-70 seq4640 214 4e-53 >seq5874 Length=2543 Score = 269 bits (298), Expect = 7e-70 Identities = 241/289 (83%), Gaps = 11/289 (4%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||||||||| ||||| |||| ||||||| |||||||| | Sbjct 2266 CCTATCCACAGCTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGACCTCCAGTACG 2323 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| || ||||| |||||||| | Sbjct 2324 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACCTGGTTT-CGGGTCTACG-C 2378 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| ||| |||||||| | |||||||||| |||||||||| |||||| |||||||| Sbjct 2379 CCAGCAACTGAACGCCCTATTCGGACTCGCTTT-CGCTACGCCTGCCCTATACGGTTAAG 2437 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| || |||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct 2438 CTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCC--CTT 2494 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACT 292 | |||||| |||| ||||| |||| |||||||||||||||||||||| Sbjct 2495 ACGAGGCTCCGACTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACT 2543 >seq4640 Length=998 Score = 214 bits (236), Expect = 4e-53 Identities = 146/163 (90%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 256 CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGC 315 ||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 CTGTTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTC-CCGGGGTTCTTTTCGC 59 Query 316 CTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATG 375 ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| Sbjct 60 CTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATG 119 Query 376 GTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 |||||||||| |||||||| |||| |||| ||| |||||| Sbjct 120 GTCCCCCCATCTTCAGACAGGATTTCACGTGTCCCGCCCTACT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241457265664