Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177835.1_202017-04- 25] 11,496 sequences; 12,629,710 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5874 374 3e-101 >seq5874 Length=2543 Score = 374 bits (414), Expect = 3e-101 Identities = 408/540 (76%), Gaps = 21/540 (4%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||||||| |||||| |||| |||||| ||||||||||||||| |||||||| |||| Sbjct 2407 CGAGTCCGAATAGGGCGTTCAGTTGCTGGGCGTAGACCCGAAACCAGGTGATCTATCCAT 2348 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct 2347 GGCCAGGATGAAGGTGCGGTAACACGTACTGGAGGTCCGAACCCACTAACGTTGAAAAGT 2288 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 2287 TAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACCTGGAAATAGCTGGTTCTC 2228 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTAT-----------CACCATCGGGGGTAGAG 229 |||||||||||||||||||||||||| || | Sbjct 2227 TCCGAAAACTATTTAGGTAGTGCCTCGTGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN 2168 Query 230 CACTGTTATGGCTAGGGGGTC-ATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC 288 |||| | ||||||| ||||| ||||| |||| ||||||||||||| | Sbjct 2167 NNNNNNNATGGTTGGGGGGTCTATTGCAGATTACCCCGCCATAGCAAACTCCGAATACCG 2108 Query 289 ATCAGTTTTACCGCGGGAGTGAGGGCAT-GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAG 347 | ||| | | |||||| | | ||| ||||||||| ||||| | ||||| || Sbjct 2107 AAGAGTGCAATCACGGGAGACA-GACATCGGGTGCTAACGTCCGGTGTCAAGAGGGAAAC 2049 Query 348 AATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGAT 407 || || ||| ||||||||| ||| |||| | |||||||| | |||||||| || Sbjct 2048 AACCCAGACCGCCAGCTAAGGTCCCCAAAT-ATAGCTAAGTGGGA--AACGAAGTGGGAA 1992 Query 408 TGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAG 467 ||||| |||| |||| |||||||| |||||||||| | |||||||| |||||| || Sbjct 1991 GGCTAAAACAGTCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTTAAAGAAAGCGTAATAG 1933 Query 468 CTCACTAGTCGAGGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGC 526 |||||| ||||| ||| ||| ||| || | |||| |||| | | ||||||||| Sbjct 1932 CTCACTGATCGAGTCGTCCTGCGCGGAAGATGTAACGGG-GCTAAGCTATATACCGAAGC 1874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689405763584