Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04- 25] 2,975 sequences; 11,604,234 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq379 352 1e-94 seq2285 168 2e-39 >seq379 Length=252 Score = 352 bits (390), Expect = 1e-94 Identities = 232/253 (92%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 100 CCATCCAGT-GCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGG 158 ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 252 CCATCCAGTAGCTCTACCTCCGGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGG 193 Query 159 GGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCT 218 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 192 GGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCC 133 Query 219 CAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCC 278 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 132 AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCC 73 Query 279 CATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGA 336 ||||| |||||||||||||||||||||| || | || ||| || |||||| |||||| Sbjct 72 CATGGCTAGATCACTTCGCTTCGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGA 14 Query 337 CTCGCTTTCGCTA 349 ||||||||||||| Sbjct 13 CTCGCTTTCGCTA 1 >seq2285 Length=176 Score = 168 bits (186), Expect = 2e-39 Identities = 110/121 (91%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1 GTACTATTTCACTCCCCTCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 60 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 61 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 120 Query 598 C 598 | Sbjct 121 C 121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817545926400