Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04- 25] 2,975 sequences; 11,604,234 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2285 120 8e-25 seq379 78.8 2e-12 >seq2285 Length=176 Score = 120 bits (132), Expect = 8e-25 Identities = 109/136 (80%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 283 CTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTAT 342 |||||||||||||||| | ||||| |||||| |||||||||||||||||| || | |||| Sbjct 4 CTATTTCACTCCCCTC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTAT 62 Query 343 CGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCT 402 |||||| | ||||||||||| ||| | ||||| ||| ||||| || | ||||| Sbjct 63 CGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCT 122 Query 403 CGTGCTCCGTCCTACT 418 || || |||| ||||| Sbjct 123 CGGGCCCCGTGCTACT 138 >seq379 Length=252 Score = 78.8 bits (86), Expect = 2e-12 Identities = 117/156 (75%), Gaps = 10/156 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 148 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGT-CTT 92 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| | |||||||||||||| || |||||| | | |||||||||| |||||| Sbjct 91 ACCC-GCGCTTCAACCTGCCCAT-GGCTAGATCACTTCG-CTTCGGGTCTA-GACCCAGC 36 Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTA 162 ||||| | |||||| | ||||||| |||||||| Sbjct 35 GACTATGGGCGCCCTGTTCGGACTCGC-TTTCGCTA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241563062400