Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04-
25] 2,975 sequences; 11,604,234 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1117 717 0.0
seq2174 141 3e-31
seq1168 78.8 3e-12
>seq1117
Length=2724
Score = 717 bits (794), Expect = 0.0
Identities = 462/498 (93%), Gaps = 9/498 (2%)
Strand=Plus/Minus
Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 109
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2724 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 2665
Query 110 TGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAA 166
|||| |||||||||||| |||| |||| ||||||| || || |||| ||| ||||
Sbjct 2664 TGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAA 2606
Query 167 GACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC 226
|||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||| ||
Sbjct 2605 TTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGC 2546
Query 227 GCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGA 285
|||||| |||||||||||||||||||| ||| | ||| ||||||| ||| ||||||
Sbjct 2545 GCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGA 2490
Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2489 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGT 2430
Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 2370
Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 2310
Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2309 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 2250
Query 526 CGTCAACATCACTTTCTG 543
||||||||||||||||||
Sbjct 2249 CGTCAACATCACTTTCTG 2232
>seq2174
Length=1030
Score = 141 bits (156), Expect = 3e-31
Identities = 86/91 (95%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 940 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 999
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||||||||||||||||||||||||||||||
Sbjct 1000 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1030
>seq1168
Length=5583
Score = 78.8 bits (86), Expect = 3e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
|||||| ||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 5583 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 5533
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635151352800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |