Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177845.1_202017-04- 25] 2,975 sequences; 11,604,234 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1117 717 0.0 seq2174 141 3e-31 seq1168 78.8 3e-12 >seq1117 Length=2724 Score = 717 bits (794), Expect = 0.0 Identities = 462/498 (93%), Gaps = 9/498 (2%) Strand=Plus/Minus Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 109 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2724 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAA 2665 Query 110 TGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAA 166 |||| |||||||||||| |||| |||| ||||||| || || |||| ||| |||| Sbjct 2664 TGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAA 2606 Query 167 GACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC 226 |||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||| || Sbjct 2605 TTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGC 2546 Query 227 GCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGA 285 |||||| |||||||||||||||||||| ||| | ||| ||||||| ||| |||||| Sbjct 2545 GCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGA 2490 Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2489 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGT 2430 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2429 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 2370 Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2369 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 2310 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2309 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 2250 Query 526 CGTCAACATCACTTTCTG 543 |||||||||||||||||| Sbjct 2249 CGTCAACATCACTTTCTG 2232 >seq2174 Length=1030 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 940 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 999 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 1000 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1030 >seq1168 Length=5583 Score = 78.8 bits (86), Expect = 3e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 |||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 5583 AGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 5533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635151352800