Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900177875.1_202017-04- 25] 23,151 sequences; 12,698,172 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1078 152 8e-35 seq2257 98.7 1e-18 seq21640 95.1 2e-17 seq988 87.8 3e-15 >seq1078 Length=766 Score = 152 bits (168), Expect = 8e-35 Identities = 114/130 (88%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 128 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 71 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||| | | ||||| |||||| Sbjct 70 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGACGGAGTTTCACAAGATT 11 Query 120 ACCCGGACCT 129 ||| ||||| Sbjct 10 ACCAAGACCT 1 >seq2257 Length=61 Score = 98.7 bits (108), Expect = 1e-18 Identities = 56/57 (98%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 57 TCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGC 1 >seq21640 Length=61 Score = 95.1 bits (104), Expect = 2e-17 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 57 TCAGTGTAGCGCGCGTGCGGCCCAGAGCGTCTAAGGGCATCACAGACCTGTTATTGC 1 >seq988 Length=85 Score = 87.8 bits (96), Expect = 3e-15 Identities = 73/87 (84%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 101 CGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATAC 159 ||| | | ||||| ||||||||| ||||| ||||||||||| |||||||| || | | Sbjct 85 CGACGGAGTTTCACAAGATTACCAAGACCTCTCGGCCAAGGT--TAGACTCGCTGGCTCC 28 Query 160 ATCAGTGTAGCGCGCGTGCGGCCCAGA 186 |||||||||||||||||||||||||| Sbjct 27 GTCAGTGTAGCGCGCGTGCGGCCCAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751831344965